G457269


Basic Information

Item Value
gene id G457269
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 1961457 ~ 1961750 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524898
CAGACAACCAATCGCGTGCCTCATATTCACGTGCTTAGGAAAGTCACGGAAACACCTTGCATTGTATATAAACAGTAAATTCAGCGTTTGAGACGAAAAATGTAAATTGCTGACAGAAAACATGACAATTTGAGTGAAGAAGAGACCGTTTCATTCTTATCTTTATGGTCCGAAATGTCTATTCAGTATAAACTCGATAGTACAGTTGACAATATGAGAATGCGCAATGCTGGAGCTATGTAAACAGGTCGCATGCTGCGTTTATCCAATCAGTGACACTGACACTGAAAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524898 True 294 lncRNA 0.39 1 1961457 1961750

Neighbor

gene id symbol gene type direction distance location
CI01000321_01789650_01796167 CNDP2 coding upstream 164940 1789304 ~ 1796517 (+)
CI01000321_01778626_01782120 TXNL4A, TXN4A, BRAFLDRAFT_119072, TXNL4A.S coding upstream 179122 1778626 ~ 1782335 (+)
CI01000321_01773447_01776531 ADNP2B coding upstream 184913 1773072 ~ 1776544 (+)
CI01000321_01767234_01768560 NTF2, NUTF2L coding upstream 192690 1767234 ~ 1768767 (+)
CI01000321_01741333_01755566 KAT2B coding upstream 205099 1741221 ~ 1756358 (+)
CI01000321_02060877_02067096 TSHZ1 coding downstream 99127 2060877 ~ 2067521 (+)
CI01000321_02069556_02082569 NA coding downstream 107504 2069254 ~ 2083342 (+)
CI01000321_02205260_02210288 NA coding downstream 242767 2204517 ~ 2210526 (+)
CI01000321_02306311_02308161 GALR1, GALR1A coding downstream 344371 2306121 ~ 2308202 (+)
CI01000321_02359797_02366314 SALL3B, SALL3 coding downstream 398047 2359797 ~ 2366359 (+)
G457262 NA non-coding upstream 8838 1952359 ~ 1952619 (+)
G457255 NA non-coding upstream 19332 1941918 ~ 1942125 (+)
G457253 NA non-coding upstream 27489 1933732 ~ 1933968 (+)
G457245 NA non-coding upstream 33846 1927175 ~ 1927611 (+)
G457191 NA non-coding upstream 139955 1821141 ~ 1821502 (+)
G457282 NA non-coding downstream 11248 1972998 ~ 1973207 (+)
G457372 NA non-coding downstream 63548 2025298 ~ 2025509 (+)
G457307 NA non-coding downstream 68505 2030255 ~ 2043102 (+)
G457376 NA non-coding downstream 145256 2107006 ~ 2107463 (+)
G457394 NA non-coding downstream 198227 2159977 ~ 2160736 (+)
CI01000321_00815160_00819665 NA other upstream 1138610 815160 ~ 819749 (+)
G456774 NA other upstream 1534432 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 1827568 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 2044876 4013468 ~ 4015412 (+)
G459303 NA other downstream 2523647 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 2553784 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 2785662 4747650 ~ 4749579 (+)

Expression


Co-expression Network