Gene
RNA
| Item | Value |
|---|---|
| gene id | G457396 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 2192206 ~ 2192616 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU525049 | True | 411 | lncRNA | 0.31 | 1 | 2192206 | 2192616 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000321_02069556_02082569 | NA | coding | upstream | 108864 | 2069254 ~ 2083342 (+) |
| CI01000321_02060877_02067096 | TSHZ1 | coding | upstream | 124685 | 2060877 ~ 2067521 (+) |
| CI01000321_01789650_01796167 | CNDP2 | coding | upstream | 395689 | 1789304 ~ 1796517 (+) |
| CI01000321_01778626_01782120 | TXNL4A, TXN4A, BRAFLDRAFT_119072, TXNL4A.S | coding | upstream | 409871 | 1778626 ~ 1782335 (+) |
| CI01000321_01773447_01776531 | ADNP2B | coding | upstream | 415662 | 1773072 ~ 1776544 (+) |
| CI01000321_02205260_02210288 | NA | coding | downstream | 11901 | 2204517 ~ 2210526 (+) |
| CI01000321_02306311_02308161 | GALR1, GALR1A | coding | downstream | 113505 | 2306121 ~ 2308202 (+) |
| CI01000321_02359797_02366314 | SALL3B, SALL3 | coding | downstream | 167181 | 2359797 ~ 2366359 (+) |
| CI01000321_02371786_02421055 | ATP9B | coding | downstream | 179045 | 2371661 ~ 2421699 (+) |
| CI01000321_02433523_02469055 | NFATC1 | coding | downstream | 240907 | 2433523 ~ 2469069 (+) |
| G457332 | NA | non-coding | upstream | 11045 | 2179789 ~ 2181161 (+) |
| G457394 | NA | non-coding | upstream | 31470 | 2159977 ~ 2160736 (+) |
| G457376 | NA | non-coding | upstream | 84743 | 2107006 ~ 2107463 (+) |
| G457307 | NA | non-coding | upstream | 149104 | 2030255 ~ 2043102 (+) |
| G457372 | NA | non-coding | upstream | 166697 | 2025298 ~ 2025509 (+) |
| G457306 | NA | non-coding | downstream | 80184 | 2272800 ~ 2284518 (+) |
| G457431 | NA | non-coding | downstream | 104878 | 2297494 ~ 2297733 (+) |
| G457439 | NA | non-coding | downstream | 126792 | 2319408 ~ 2319655 (+) |
| G457440 | NA | non-coding | downstream | 127389 | 2320005 ~ 2320367 (+) |
| G457460 | NA | non-coding | downstream | 234304 | 2426920 ~ 2427188 (+) |
| CI01000321_00815160_00819665 | NA | other | upstream | 1369359 | 815160 ~ 819749 (+) |
| G456774 | NA | other | upstream | 1765181 | 426083 ~ 427025 (+) |
| CI01000321_03795430_03804685 | SHISA7B, SHISA7 | other | downstream | 1596702 | 3792915 ~ 3805511 (+) |
| CI01000321_04013470_04014515 | CACNG8 | other | downstream | 1814010 | 4013468 ~ 4015412 (+) |
| G459303 | NA | other | downstream | 2292781 | 4485397 ~ 4488552 (+) |
| CI01000321_04515562_04517953 | MRPS21 | other | downstream | 2322918 | 4515534 ~ 4518187 (+) |
| CI01000321_04748037_04748315 | DPM3 | other | downstream | 2554796 | 4747650 ~ 4749579 (+) |
