Gene
RNA
| Item | Value |
|---|---|
| gene id | G457506 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 2601863 ~ 2602609 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU525166 | True | 455 | lncRNA | 0.35 | 2 | 2601863 | 2602609 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000321_02515869_02522379 | NA | coding | upstream | 79379 | 2515346 ~ 2522484 (+) |
| CI01000321_02508568_02513821 | NA | coding | upstream | 87956 | 2508568 ~ 2513907 (+) |
| CI01000321_02433523_02469055 | NFATC1 | coding | upstream | 132794 | 2433523 ~ 2469069 (+) |
| CI01000321_02371786_02421055 | ATP9B | coding | upstream | 180164 | 2371661 ~ 2421699 (+) |
| CI01000321_02359797_02366314 | SALL3B, SALL3 | coding | upstream | 235504 | 2359797 ~ 2366359 (+) |
| CI01000321_02627263_02629887 | NA | coding | downstream | 24005 | 2626614 ~ 2629925 (+) |
| CI01000321_02720431_02722463 | TRHRB | coding | downstream | 117625 | 2720234 ~ 2723126 (+) |
| CI01000321_02771823_02809283 | NA | coding | downstream | 168653 | 2771262 ~ 2809420 (+) |
| CI01000321_02818757_02870940 | PKHD1L1 | coding | downstream | 215992 | 2818601 ~ 2871180 (+) |
| CI01000321_02880629_02932511 | PKHD1L1 | coding | downstream | 277449 | 2880058 ~ 2932742 (+) |
| G457495 | NA | non-coding | upstream | 53962 | 2547643 ~ 2547901 (+) |
| G457494 | NA | non-coding | upstream | 54468 | 2547131 ~ 2547395 (+) |
| G457478 | NA | non-coding | upstream | 108419 | 2493119 ~ 2493444 (+) |
| G457477 | NA | non-coding | upstream | 109310 | 2492219 ~ 2492553 (+) |
| G457474 | NA | non-coding | upstream | 112808 | 2487835 ~ 2489055 (+) |
| G457554 | NA | non-coding | downstream | 64801 | 2667410 ~ 2667633 (+) |
| G457555 | NA | non-coding | downstream | 65662 | 2668271 ~ 2668782 (+) |
| G457556 | NA | non-coding | downstream | 66379 | 2668988 ~ 2669550 (+) |
| G457557 | NA | non-coding | downstream | 67121 | 2669730 ~ 2670162 (+) |
| G457637 | NA | non-coding | downstream | 237767 | 2840376 ~ 2841152 (+) |
| CI01000321_00815160_00819665 | NA | other | upstream | 1779016 | 815160 ~ 819749 (+) |
| G456774 | NA | other | upstream | 2174838 | 426083 ~ 427025 (+) |
| CI01000321_03795430_03804685 | SHISA7B, SHISA7 | other | downstream | 1186709 | 3792915 ~ 3805511 (+) |
| CI01000321_04013470_04014515 | CACNG8 | other | downstream | 1404017 | 4013468 ~ 4015412 (+) |
| G459303 | NA | other | downstream | 1882788 | 4485397 ~ 4488552 (+) |
| CI01000321_04515562_04517953 | MRPS21 | other | downstream | 1912925 | 4515534 ~ 4518187 (+) |
| CI01000321_04748037_04748315 | DPM3 | other | downstream | 2144803 | 4747650 ~ 4749579 (+) |
