G457554


Basic Information

Item Value
gene id G457554
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 2667410 ~ 2667633 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU525223
TTTACAGTCTCCATTTTACCAAACAGATCAGCTTCCAGGAAACATGCATTCATTAAGTACTAAGCAGCACACTTTCCACAAGCATTTTGTCTGGACTTTGGAAGAAATATAAAAATAACCGAAGGAAAAATCTGTTATTTAGAGGAAGCTGGTCGTTTATGAGTCACAACAGGATCTTTCCATCTCAGTTTGCTTCTTTGACAACACACAATCTGTGTTTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU525223 True 224 lncRNA 0.37 1 2667410 2667633

Neighbor

gene id symbol gene type direction distance location
CI01000321_02627263_02629887 NA coding upstream 37485 2626614 ~ 2629925 (+)
CI01000321_02515869_02522379 NA coding upstream 144926 2515346 ~ 2522484 (+)
CI01000321_02508568_02513821 NA coding upstream 153503 2508568 ~ 2513907 (+)
CI01000321_02433523_02469055 NFATC1 coding upstream 198341 2433523 ~ 2469069 (+)
CI01000321_02371786_02421055 ATP9B coding upstream 245711 2371661 ~ 2421699 (+)
CI01000321_02720431_02722463 TRHRB coding downstream 52601 2720234 ~ 2723126 (+)
CI01000321_02771823_02809283 NA coding downstream 103629 2771262 ~ 2809420 (+)
CI01000321_02818757_02870940 PKHD1L1 coding downstream 150968 2818601 ~ 2871180 (+)
CI01000321_02880629_02932511 PKHD1L1 coding downstream 212425 2880058 ~ 2932742 (+)
CI01000321_02934935_02935222 NA coding downstream 266333 2933966 ~ 2935348 (+)
G457506 NA non-coding upstream 64801 2601863 ~ 2602609 (+)
G457495 NA non-coding upstream 119509 2547643 ~ 2547901 (+)
G457494 NA non-coding upstream 120015 2547131 ~ 2547395 (+)
G457478 NA non-coding upstream 173966 2493119 ~ 2493444 (+)
G457477 NA non-coding upstream 174857 2492219 ~ 2492553 (+)
G457555 NA non-coding downstream 638 2668271 ~ 2668782 (+)
G457556 NA non-coding downstream 1355 2668988 ~ 2669550 (+)
G457557 NA non-coding downstream 2097 2669730 ~ 2670162 (+)
G457637 NA non-coding downstream 172743 2840376 ~ 2841152 (+)
G457674 NA non-coding downstream 335295 3002928 ~ 3092289 (+)
CI01000321_00815160_00819665 NA other upstream 1844563 815160 ~ 819749 (+)
G456774 NA other upstream 2240385 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 1121685 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 1338993 4013468 ~ 4015412 (+)
G459303 NA other downstream 1817764 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 1847901 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 2079779 4747650 ~ 4749579 (+)

Expression


Co-expression Network