Item | Value |
---|---|
gene id | G457766 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000321 |
NCBI id | null |
chromosome length | 5206101 |
location | 3204735 ~ 3205121 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU525469 | True | 387 | lncRNA | 0.42 | 1 | 3204735 | 3205121 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000321_03191343_03195029 | SSR2 | coding | upstream | 9599 | 3191343 ~ 3195136 (+) |
CI01000321_03186100_03187507 | IRGF3, IRGF1 | coding | upstream | 17072 | 3185464 ~ 3187663 (+) |
CI01000321_03180351_03181771 | IRGF1 | coding | upstream | 22541 | 3180260 ~ 3182194 (+) |
CI01000321_03167446_03169899 | NA | coding | upstream | 34520 | 3167446 ~ 3170215 (+) |
CI01000321_03151181_03167324 | NA | coding | upstream | 37411 | 3151181 ~ 3167324 (+) |
CI01000321_03212011_03226326 | NA | coding | downstream | 6740 | 3211861 ~ 3226399 (+) |
CI01000321_03245667_03250403 | NA | coding | downstream | 40546 | 3245667 ~ 3251557 (+) |
CI01000321_03258454_03289329 | ARHGEF1A, ARHGEF2 | coding | downstream | 53201 | 3258322 ~ 3289433 (+) |
CI01000321_03294654_03298670 | NA | coding | downstream | 89349 | 3294470 ~ 3298801 (+) |
CI01000321_03303567_03306121 | XTM4 | coding | downstream | 98157 | 3303278 ~ 3306121 (+) |
G457765 | NA | non-coding | upstream | 1129 | 3201738 ~ 3203606 (+) |
G457735 | NA | non-coding | upstream | 46539 | 3156613 ~ 3158196 (+) |
G457664 | NA | non-coding | upstream | 159094 | 3044727 ~ 3045641 (+) |
G457662 | NA | non-coding | upstream | 160146 | 3041193 ~ 3044589 (+) |
G457667 | NA | non-coding | upstream | 167070 | 3035968 ~ 3037665 (+) |
G457771 | NA | non-coding | downstream | 87786 | 3292907 ~ 3293128 (+) |
G457772 | NA | non-coding | downstream | 88009 | 3293130 ~ 3293378 (+) |
G457773 | NA | non-coding | downstream | 114447 | 3319568 ~ 3320094 (+) |
G457775 | NA | non-coding | downstream | 135399 | 3340520 ~ 3340744 (+) |
CI01000321_03351289_03352346 | NA | non-coding | downstream | 146092 | 3350984 ~ 3352677 (+) |
CI01000321_00815160_00819665 | NA | other | upstream | 2381888 | 815160 ~ 819749 (+) |
G456774 | NA | other | upstream | 2777710 | 426083 ~ 427025 (+) |
CI01000321_03795430_03804685 | SHISA7B, SHISA7 | other | downstream | 584197 | 3792915 ~ 3805511 (+) |
CI01000321_04013470_04014515 | CACNG8 | other | downstream | 801505 | 4013468 ~ 4015412 (+) |
G459303 | NA | other | downstream | 1280276 | 4485397 ~ 4488552 (+) |
CI01000321_04515562_04517953 | MRPS21 | other | downstream | 1310413 | 4515534 ~ 4518187 (+) |
CI01000321_04748037_04748315 | DPM3 | other | downstream | 1542291 | 4747650 ~ 4749579 (+) |