G457766



Basic Information


Item Value
gene id G457766
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 3204735 ~ 3205121 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU525469
GTCGTGCGTACCAAATGATATACAACGGATTTATTTAATGCGATTGTCATGCGCATTATTCCTCTTTCGATGCGTTCCTTCCCATCTGATTCAAAACGTCTGCTTCAAGATCGCGTTGGTTAAATAAGAACAGATGTCCAGCCATTGATCTGAGCTGAGTCCACTTATTTTCTTGCGTGCAATATTACGGTCACCCTAACTAATGCTCCGATAATTGTCTGACTTGTTTCCTGCTTAAATGAACAAATGAGCCTGTTTTAGTTGAATGAATCATTCCAGCGTCAATCGCTCAACCGTATTCCAAAGGATTTATGGAGCTGCAGAGAGAGTTACCTATGATACATACATCCACCCCCTGTTCTTCATTTGAGGTGTACTGTGGCAAGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU525469 True 387 lncRNA 0.42 1 3204735 3205121

Neighbor


gene id symbol gene type direction distance location
CI01000321_03191343_03195029 SSR2 coding upstream 9599 3191343 ~ 3195136 (+)
CI01000321_03186100_03187507 IRGF3, IRGF1 coding upstream 17072 3185464 ~ 3187663 (+)
CI01000321_03180351_03181771 IRGF1 coding upstream 22541 3180260 ~ 3182194 (+)
CI01000321_03167446_03169899 NA coding upstream 34520 3167446 ~ 3170215 (+)
CI01000321_03151181_03167324 NA coding upstream 37411 3151181 ~ 3167324 (+)
CI01000321_03212011_03226326 NA coding downstream 6740 3211861 ~ 3226399 (+)
CI01000321_03245667_03250403 NA coding downstream 40546 3245667 ~ 3251557 (+)
CI01000321_03258454_03289329 ARHGEF1A, ARHGEF2 coding downstream 53201 3258322 ~ 3289433 (+)
CI01000321_03294654_03298670 NA coding downstream 89349 3294470 ~ 3298801 (+)
CI01000321_03303567_03306121 XTM4 coding downstream 98157 3303278 ~ 3306121 (+)
G457765 NA non-coding upstream 1129 3201738 ~ 3203606 (+)
G457735 NA non-coding upstream 46539 3156613 ~ 3158196 (+)
G457664 NA non-coding upstream 159094 3044727 ~ 3045641 (+)
G457662 NA non-coding upstream 160146 3041193 ~ 3044589 (+)
G457667 NA non-coding upstream 167070 3035968 ~ 3037665 (+)
G457771 NA non-coding downstream 87786 3292907 ~ 3293128 (+)
G457772 NA non-coding downstream 88009 3293130 ~ 3293378 (+)
G457773 NA non-coding downstream 114447 3319568 ~ 3320094 (+)
G457775 NA non-coding downstream 135399 3340520 ~ 3340744 (+)
CI01000321_03351289_03352346 NA non-coding downstream 146092 3350984 ~ 3352677 (+)
CI01000321_00815160_00819665 NA other upstream 2381888 815160 ~ 819749 (+)
G456774 NA other upstream 2777710 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 584197 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 801505 4013468 ~ 4015412 (+)
G459303 NA other downstream 1280276 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 1310413 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 1542291 4747650 ~ 4749579 (+)

Expression



Co-expression Network