Gene
RNA
| Item | Value |
|---|---|
| gene id | G457771 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 3292907 ~ 3293128 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU525474 | True | 222 | lncRNA | 0.37 | 1 | 3292907 | 3293128 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000321_03258454_03289329 | ARHGEF1A, ARHGEF2 | coding | upstream | 3474 | 3258322 ~ 3289433 (+) |
| CI01000321_03245667_03250403 | NA | coding | upstream | 41350 | 3245667 ~ 3251557 (+) |
| CI01000321_03212011_03226326 | NA | coding | upstream | 66508 | 3211861 ~ 3226399 (+) |
| CI01000321_03191343_03195029 | SSR2 | coding | upstream | 97771 | 3191343 ~ 3195136 (+) |
| CI01000321_03186100_03187507 | IRGF3, IRGF1 | coding | upstream | 105244 | 3185464 ~ 3187663 (+) |
| CI01000321_03294654_03298670 | NA | coding | downstream | 1342 | 3294470 ~ 3298801 (+) |
| CI01000321_03303567_03306121 | XTM4 | coding | downstream | 10150 | 3303278 ~ 3306121 (+) |
| CI01000321_03324526_03332195 | NA | coding | downstream | 31398 | 3324526 ~ 3333862 (+) |
| CI01000321_03348458_03349276 | NA | coding | downstream | 55246 | 3348374 ~ 3349487 (+) |
| CI01000321_03351289_03352346 | NA | coding | downstream | 57856 | 3350984 ~ 3352677 (+) |
| G457766 | NA | non-coding | upstream | 87786 | 3204735 ~ 3205121 (+) |
| G457765 | NA | non-coding | upstream | 89301 | 3201738 ~ 3203606 (+) |
| G457735 | NA | non-coding | upstream | 134711 | 3156613 ~ 3158196 (+) |
| G457664 | NA | non-coding | upstream | 247266 | 3044727 ~ 3045641 (+) |
| G457662 | NA | non-coding | upstream | 248318 | 3041193 ~ 3044589 (+) |
| G457772 | NA | non-coding | downstream | 2 | 3293130 ~ 3293378 (+) |
| G457773 | NA | non-coding | downstream | 26440 | 3319568 ~ 3320094 (+) |
| G457775 | NA | non-coding | downstream | 47392 | 3340520 ~ 3340744 (+) |
| G457780 | NA | non-coding | downstream | 91305 | 3384433 ~ 3448259 (+) |
| CI01000321_00815160_00819665 | NA | other | upstream | 2470060 | 815160 ~ 819749 (+) |
| G456774 | NA | other | upstream | 2865882 | 426083 ~ 427025 (+) |
| CI01000321_03795430_03804685 | SHISA7B, SHISA7 | other | downstream | 496190 | 3792915 ~ 3805511 (+) |
| CI01000321_04013470_04014515 | CACNG8 | other | downstream | 713498 | 4013468 ~ 4015412 (+) |
| G459303 | NA | other | downstream | 1192269 | 4485397 ~ 4488552 (+) |
| CI01000321_04515562_04517953 | MRPS21 | other | downstream | 1222406 | 4515534 ~ 4518187 (+) |
| CI01000321_04748037_04748315 | DPM3 | other | downstream | 1454284 | 4747650 ~ 4749579 (+) |
