G459011


Basic Information

Item Value
gene id G459011
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 3810127 ~ 3816395 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU526931
AACTGTTACATAATAAAATATAATACGCATTGTACAGTACAGATTGGCCATTCCTCTCACCCGCTAGCCAATCTCGCAACCAAAAACATTAACACTTGCCATAGAAACACCTGCAAAGGTTTCTTTACATATTTCTTTAAAAAAACAGATGACATTAAACACAGGAACATGGCATTAGCAACACCATTCTGTCCCCTTCGCATCGGCTCTGCAGAATATTTTGCACATTTTGACAGTTTCACTGCAGTGAGTCCTCTTTGAGACACTGTTGAGTTCAACATGGAGTGTCATAATTGAGGTTGTTCATAGGGAATACACACTATGTTCTTGATCCTTTTCCCAAAACCAGTAACTTTCAGTTCCAGATCAAACATTTGCATTTTAACATGAAGACAGCAAAAGGGGGGAAAACAAAACGCAACACCACAATGAACAAAAAAGCTACGTATATTTGAGAGTAAACAAAGGCTATACCGTTAAGCTCTGAGTACTGGGGGGAAACTAGAGAATAGATTGTTACGGTTCAAATTAGTTCACTTTCACTGGTATGCATCCATCATTGCAGCACAAATAAAGTTACGAAAATACATAATGAATGCATTTTTAGAGGATAGAGATGCTACCATTACAACAAAGGTGCTACCAAAAACAGTTCCATAATCTAGAATATTCTTCCCCTTTGGAGAAACCGTGTTAGAGATCCATGTCTATAATGGATGGTTCTTTAGGTACAGGCTTGTTTTCACATCAACTGAGTCTTTTATTTTTTAGAGGCACTCCCTTGGTTATAGTCTGACCACATGTTTAAGGAGTTAATGTGTGGCGATTTCCATCAAAGTCCTCTATGTCTATTGTCATGTGATCCTTGCCTCGGAAACATCAGTTTTTAAGGCCTTAAGGCCTTTTATAGATGTCAGTTTACTTAGTGCCTGTACCCTGTCACAACTGTTGATCTTTCAATCTGGTCCTCTGTCTTCTGAACATTAGTCCCCTTTATTGACATTCTGATTCCTCTACTGACACGCTGACAAGCAAATTTGTGGCGCTGCAGGAGGGTGCCATTCCAGAATCTAGAGGGACATCGAGAGCAAGAGAACGCCCCTTGAGACAGGTGGTGGGCCCGATGACGGAGAGCTGTCAGTAGCCTTCGAGAACGTTTTCCACAGACTATGCAGCGCAGTCGATTCTGACGGCCATGTTTTCTTGGAGGATGCCTGGTTACACGGTGCACTGAAAGAATTATGCGGCTTGAAAAAGTGGTAAAGGGACAGACAGGGCAAGAATATGACTTTAAGGGGACGATGAGAGACTGAAGGCCTCTAAACCTTAACCGCCCTGCACGCCATGTGCCTCCACCTACATTTAAACCAAGCCCTCCTCCAGTAAACTTGGCCCATTTCAGCTGAGCTATCCACTTCTTTCTCTTTAGCTGCTGCTGAAGCCTGCATTTCTTCCGTTTTAAATACATACGCCTCCTGGCAATTTCGTAAGCACTGAATCCAGTCATCAACTGCATGCCACTAGCCAGTTTATATTTTTTCTTTTTTTTTTTCTTCTTCCTCTGGGTATCATCTCCCGGGGCCTGAGGGCTTGGCTGTGGATGTTGAGACTGCATTGAAAAAAGGTGCTGTTGCTGGTGGTGTTGAGAGTGCTGGGGTGGCGAAATGTGGATATGAGGTGGAGTGGAATGAAGGGTGTTACCTGGAACCCCTGAATAAATTAGCTGTTTCCCACCGATTGGCTGTTGAAGCTGGAGGGGACCCATATTGGGGTTTGAGTAGTGCAGATGTTGGGGGTGTGAAGTGACATTTGAACTGTGATGTCCTGACTCTGGAGTGTAGAAGAGAGGAGAATAACCAGCAGGCTGAGGATGCTGTGTGTGAGCTATGGTTGAATGGGGCTGTTGTACTCCATGACTTCCACTTTCAGGTGTTATATGAAGGAGTGCATTGGTTGCAGCCTCGCTCTCAGAGACAGATGGGGCAGTTCCAATAGATTCACTTCCTGTTGGTTGTGTTGTTGGCCCAGTACGAGTCAAACCGTGTTGAGATAATCTATGTCTGGTCAGGCTGTTGGAGTAAGAAAACGCCTTACCGCACACTTCACATGAAAACAGTTTCTCCCCACCGTGTTCATGAATGGCTTGGTGATGAGCAGTCAGGTGGAAGTGATGGCGGAAAGATTTCCAGCAAATCTCACATGTATATAGCTTAGGAGGGGGTTGGTTGCTTGTGCTAGCATTAGATCCTTGAACTTTATCCTGAGAATAGGAGTAATAAGCGCCAGGGTTGGTTTGATTAGATTGATTGGTTTGATCAGGTTGATCTTGATTAGTGGGTCCCCCTTGATTTGCAGCAGATTTGGTTTTACTCCGCCTTGGCTTGAAATCTCCCCGTAGATGCAGTTTTTCATGCCTTTTCAGACTCTGTGCATATCCAAAATCTTTTCCACAAAGGTTACATTTGTAGTTCTTCTCCCCCGAGTGAACAGTCTGATGTTTGGTAAGATGAAACGGCTCTCGGAAGTCTTTACCACAAATGTCACAATGAAATGGCTTTTCCCCCGTATGCACACGTTCGTGCCGTCTTAAGGTCTCACGTCTGCTAAAGCCCCGCCCACAAACAGTGCATAAATAAGGCCTTTCGGAACCATCTCCAGCAGCACCACTCGGATTATTTCTCCGACGTTTCACTCCTTCTCCTGGAGCCCCACCAGGTCTCGGTTCTCTTTTCTGTCTGGGCTTCCGTGGCCGCTTGGGTTTGGCATTAGGATTGTTGGCATTCTGTGAATTAGGCTGCTGTTGGGTGGGGTGAGATAAAGGTATCATTGAACCACTCAGGCATTCTTCATTCCCACCATTTCCTGTAGATGTAGATGAAGAGTCATCCAAAAGAGAGGAGAGAGGAAGATGAGATTGCTGTTGGTGATGGTGCTGCTGATTTTGAGGGTGTGGATGAAGTGTTGGGGCTAAAGGAGCTTTTCTGAGAGCCGGACTTGACATGCTGTTACTACAGGAGTCTCCAGAGTAGGATGATGGGTTGCCCTGTTGACGACGGTAGTCATCGACCCTGTATGACGTTTGGTACGGATCTCTTGAATACTCTGGATTATACTTCTCTTCAGTTTTGCCCACAGGATTTTGATTAGCACTTCTTCCCTGTGAATACAGACTGTCACAAGACATCCCTGCTGTGCTATCCTCATTCTTGCAAAATACTAATTCTTTTGTGTCAGTCATTTGTCCACCTGAAAAATCACTTTCAACTTTGCCCTCTACTGAACTTATTGAGCTACCATCACTGCTTCTAGATCTCCTCCCTGGCTTGCCACAGTCACCTGATGCAGCATGGTTAAGCAAAGAAGTGCTCTCTCTAAAGCAGCGCCCACAAGCAGGGCAGCGGTAGGGCTTCTCTTCGTGAATTTTCTCATGTCGAGTGAGAGACTCTCGACGGTTGAACGAACGCTCGCAGACAGAGCAGGCATATGGACGAGCTCCAGAGTGGATGACGCCATGCTGAAGCAGGTGTCCTCTCTTTTTGAACCCCTTTCCACATTCATTGCAACAGTATGATTTATCTGGACTTGAGCAAGCGGAAGACATGGGGTCTGGATTCTCATGCTGGTGGTGAGCATTTTGAGAAATTCCATCTTGTGTTGAATGGGGGAGATCTGACTGGTGCTGATGACTTGGGTTTGTGTTTGTGCTGCTGTTGGGACCACTACCATCTTCTCCATGGCAGCGTATGTGTCGACGAAGGCTTGGGAGGTGGGAAAAAGACTTGCCGCACTCTCCACAATGAAAGAGAGGTTCTTGCTCTGGCTGTGTGATATTGGGAGTCATTGATTGCTGGTTTTCAGGCTTGGGGTTTTGAGAGATATTTGATACCAGCACAGAAGCAGAATTTGAAGATGGGGCAGAGGAAGAAGAGGAGGAGACAGTTGAAGAAGAGGAGGATGGTGTTGACGAGGAGAGGATGGAGGAGGGGTCACCACCAAGACCCCTCATACCAACCCCTCCACCTCCTCCCACAAGACCAGAGGACCCATCATGACCATGTGCCCCAGAGCTGCCATGGCAGTTAGCACTGCTTGTACTGCTGCTACTGTTACCATCTGTCTTCCTCTGGGGCAGGTAGCCAGCCATGGCTTTCTTTCTCCTGCTGCCACTACCTCCACTTCCTCCAGCCCCAGATCCACTATCACCTTTCCCATCATCTTTTGGTACAGAGAGATGGAGTGGGAGTGGCAAAGGCAGGCCTGCTTCTTGTTGCATTAGAGAAGCCAGCTGATTTGAGGAAAGAACAGGAATACCTTGGAAATCAAAACCACCAAGTGGTGATGGTTGGGGGGCAGGGTGTAGAGGGTGGTGTGGATGGGCATGGCTGTGAGGGTGGGACAACGCATGAGGTGGCAGCTGCTGCTGCTGTTGTTGGGGCTGGGGAGTTGGATGACCATGGGTGTGGGAAGGATGAAGGGCTGGAGGAGGAGCAAGACCTGTATTCGAATCTGCAAGACCAAGATGATTATGGGGACTCTGCTGAACTAGAAACTGTTCTAAACTGGCATTTGTGGGCACTCCAGAAAACAGGTATTGGTTTGCAGCGAGCATGCAACTAAACTGCTGGTGTAAACTTCTTGCATCAGACTGGGCTCCGACTAATCCAGCCACTGAGCTGCTACTGCTGGGGGGATTATTAGAAGTGGTGGTTGAACTTGAAGGGGAGGGTGATGACGAGGATGGTCCAGGAGATGGCTGAGGAACAGAGAGGCCGGGGTGCAAGGGTGGTGGCGGTGGCGCAGATGTTACAACTCCTCCAATTACCCCAGATCCTCCTCCAGTACTACTTCCTGCAAAATCAAAACGCCCCATTCCTGAGTGAAGCTGCTCCTGGGCTAGCGCAGCCTCAGCAGGGTGAAATGTGCGTAGGAACTGTGGATAGCCAGAGGCAGAACTGCCACTCCCACTGCTGCTGCTCATCTTGCTTGATTTACGTGTGCTTTGTGAGGATGATGACTGAGTTTGTTGTGGAAGAGGTGGAGGGGGTGCACTCATTTTGGCAAATAAGGATGAAGAATCCGCAAATGCATTACTTCTAGATCCTTGAAGGGAACCAAGGCCAAGTCCAGACAGGAGGCCACCAGACGCCTCACTCTGTTGTTGTTGCTGCTGTTGAAGCTGCTGCTGGTGCTGAAGTTGGACCTGTTGTTGGTGCTGCAGTTGTCTTTCCAGCCCCAGTCCTTTGAACTGGTGCGCCTGGTGTCCACTGAGCATTTCTAAAATGTCCATAGGGTACTTTCCAAACTGAAACATCTCCCTCTCACTGTTGAGGGATGTTTTGTAGGATTTCTTTTCCCTGTTCACTTGGTACTGCAGCAAAGTGGACAACGTAATCTAACCTAAAAGATGTGCAGAAAAAAATCTGGCACTAGGGCCACTAATAATCAATATAAAGCTTTAAAGTAATCTGCTAGCAGCTCCAGTTTTTAATAAGCAATGTCTGTGTGGGAGTAATTTGTCTGATGTTGTGACTGTCCATCCCAAACGGAGTTTTGGCTATAGTAGTGGGCCACTACATGTGAGAAAACTCTGGAAGTCTTGGATTAAATAATCATCTATAAATAAGAAAGAAAAAAAAAAAAAAAAAAAAAAAAGAAAGTAAAATGTGGTTTACAATATCATGCAATAAACACAGGTCTGGGTTAGTCTTTCAAAAGGCTATATCTACAGTTAAAACAGTAAAAACATATCTACTAATACCATATGAAATTTGTTTCACAAAATGTGTTTATCACTAAAAAGCAAATCCTTTAGTGTTGAAAGCCATTTAAAAGTGAAGCGATGAGGGAATGTCTGCCTGTCTTGATATTGGTGTATTCCTTTGACAAGTTCTAAATAAAATGGTCCCACTTTGTGATTTCCTCAGAAATGTCCTCATTTAAAGAGAAAATTCTGGTGAGCAACTTTTTTTCATTCGTTCAAGTCGGAGTGAAAAGGTGAAAGGTCAGATAGTCCACAGAGTGTATTCAACCTCTGTCTTTAACACCTCAGCTGGAAGACCACAAACACAGCACAGTGGTATGACCAAGTAGTTCTTCCTCCTCTCTGCCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU526931 True 6110 TUCP 0.46 2 3810127 3816395

Neighbor

gene id symbol gene type direction distance location
CI01000321_03793750_03794395 NA coding downstream 15137 3792795 ~ 3794990 (-)
CI01000321_03786243_03791623 NA coding downstream 18184 3785534 ~ 3791943 (-)
CI01000321_03737149_03737996 TMEM238A coding downstream 72031 3736456 ~ 3738096 (-)
CI01000321_03722066_03729777 RCVRN3 coding downstream 78627 3722008 ~ 3731500 (-)
CI01000321_03693751_03699051 NECP1, NECAP1 coding downstream 111076 3693751 ~ 3699051 (-)
CI01000321_04040511_04043535 CACNG6A coding upstream 223290 4039685 ~ 4045319 (-)
CI01000321_04099497_04107042 NA coding upstream 282219 4098614 ~ 4107042 (-)
CI01000321_04144965_04154259 FAM131BA coding upstream 328487 4144882 ~ 4154259 (-)
CI01000321_04231825_04233006 NA coding upstream 414302 4230697 ~ 4233667 (-)
CI01000321_04238830_04241926 NA coding upstream 421891 4236453 ~ 4244068 (-)
G459009 NA non-coding downstream 12666 3796308 ~ 3797461 (-)
G458984 NA non-coding downstream 109068 3700781 ~ 3701059 (-)
G458958 NA non-coding downstream 123412 3682577 ~ 3686715 (-)
G458954 NA non-coding downstream 131501 3672445 ~ 3678626 (-)
G458980 NA non-coding downstream 139706 3670197 ~ 3670421 (-)
G459065 NA non-coding upstream 102446 3918841 ~ 3919154 (-)
G459057 NA non-coding upstream 157790 3974185 ~ 3992851 (-)
G459375 NA non-coding upstream 217842 4034237 ~ 4034460 (-)
G459380 NA non-coding upstream 231319 4047714 ~ 4047935 (-)
G459387 NA non-coding upstream 239073 4055468 ~ 4055757 (-)
G458957 NA other downstream 143128 3661626 ~ 3666999 (-)
G458859 NA other downstream 320593 3471881 ~ 3489534 (-)
G458802 NA other downstream 718200 3088115 ~ 3091927 (-)
CI01000321_03044953_03048124 NA other downstream 761924 3044880 ~ 3048203 (-)
G459803 NA other upstream 1202571 5018966 ~ 5025886 (-)

Expression


Co-expression Network