G459180


Basic Information

Item Value
gene id G459180
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 4248606 ~ 4248923 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU527123
TTCTGAAGAAGCACGATTGCTTACCAAATTTGATAAACGGAAGATCAAATGTGCTTTGTTGATGTGCAAAAATCAACAAGGTTTATTCTTGTTTGTCAAGCAAGTACGAATGAGCTTGTGTTAACCATATTTGATCTATGTTCCCTGATCAATGTTTATATGCAAAAAAAAGCCTAAATCAAACCTGTCCATCATACAAAAATTTATTGTTTCCCTTCAGAAGACTTGGAATAAACTTTTCAATTTCCTTTCCGATCTCTGTATGGCCTTTTTGAATAGATTTTGAAAAGATCAATAAAAATACTGGTTTCATTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527123 True 318 lncRNA 0.31 1 4248606 4248923

Neighbor

gene id symbol gene type direction distance location
CI01000321_04223582_04224440 NA coding upstream 23095 4223582 ~ 4225511 (+)
CI01000321_04204706_04214819 IFFO1A coding upstream 33745 4204076 ~ 4214861 (+)
CI01000321_04188431_04194328 ING4 coding upstream 54221 4188431 ~ 4194385 (+)
CI01000321_04120043_04140867 CLCN1A coding upstream 107313 4120043 ~ 4141293 (+)
CI01000321_04082880_04096700 SLC2A3A coding upstream 151309 4082880 ~ 4097297 (+)
CI01000321_04274723_04276159 NA coding downstream 24922 4273845 ~ 4276225 (+)
CI01000321_04299710_04300495 NA coding downstream 49935 4298858 ~ 4300521 (+)
CI01000321_04515562_04517953 MRPS21 coding downstream 266639 4515534 ~ 4518187 (+)
CI01000321_04524751_04530395 NA coding downstream 275828 4524751 ~ 4531478 (+)
CI01000321_04532761_04559105 NA coding downstream 283838 4532761 ~ 4559105 (+)
G459178 NA non-coding upstream 11880 4236504 ~ 4236726 (+)
G459126 NA non-coding upstream 146267 4099021 ~ 4102339 (+)
G457878 NA non-coding upstream 410074 3838307 ~ 3838532 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 non-coding upstream 443095 3792915 ~ 3805511 (+)
G457874 NA non-coding upstream 510013 3736446 ~ 3738593 (+)
G459181 NA non-coding downstream 146 4249069 ~ 4249296 (+)
G459182 NA non-coding downstream 1308 4250231 ~ 4250465 (+)
G459183 NA non-coding downstream 1744 4250667 ~ 4250959 (+)
G459184 NA non-coding downstream 3667 4252590 ~ 4252866 (+)
G459185 NA non-coding downstream 4319 4253242 ~ 4253466 (+)
CI01000321_04013470_04014515 CACNG8 other upstream 234940 4013468 ~ 4015412 (+)
CI01000321_00815160_00819665 NA other upstream 3425759 815160 ~ 819749 (+)
G456774 NA other upstream 3821581 426083 ~ 427025 (+)
G459303 NA other downstream 236474 4485397 ~ 4488552 (+)
CI01000321_04748037_04748315 DPM3 other downstream 498489 4747650 ~ 4749579 (+)

Expression


Co-expression Network