Gene
RNA
| Item | Value |
|---|---|
| gene id | G459579 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 4562245 ~ 4562721 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU527581 | True | 477 | lncRNA | 0.35 | 1 | 4562245 | 4562721 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000321_04514194_04514490 | NA | coding | downstream | 47755 | 4514044 ~ 4514490 (-) |
| CI01000321_04510676_04512993 | CRABP2B, CRABP2 | coding | downstream | 48677 | 4510361 ~ 4513568 (-) |
| CI01000321_04496126_04503083 | SCAMP3 | coding | downstream | 59162 | 4495451 ~ 4503083 (-) |
| CI01000321_04483181_04491284 | NA | coding | downstream | 70961 | 4483120 ~ 4491284 (-) |
| CI01000321_04444212_04473051 | ASH1L | coding | downstream | 89194 | 4444194 ~ 4473051 (-) |
| CI01000321_04694693_04706830 | SNX27, SNX27A | coding | upstream | 131844 | 4694565 ~ 4707157 (-) |
| CI01000321_04710611_04711031 | S100A10A | coding | upstream | 147731 | 4710452 ~ 4711384 (-) |
| CI01000321_04767177_04772703 | EFNA1A | coding | upstream | 204241 | 4766962 ~ 4772703 (-) |
| CI01000321_04864287_04872091 | EFNA3A, EFNA3 | coding | upstream | 301224 | 4863945 ~ 4872091 (-) |
| CI01000321_04965389_04968595 | NA | coding | upstream | 401158 | 4963879 ~ 4969345 (-) |
| G459560 | NA | non-coding | downstream | 55334 | 4506670 ~ 4506911 (-) |
| G459428 | NA | non-coding | downstream | 118755 | 4442164 ~ 4443490 (-) |
| CI01000321_04394727_04396706 | NA | non-coding | downstream | 165668 | 4394656 ~ 4397012 (-) |
| G459536 | NA | non-coding | downstream | 283476 | 4278549 ~ 4278769 (-) |
| G459440 | NA | non-coding | downstream | 286461 | 4270828 ~ 4275784 (-) |
| G459580 | NA | non-coding | upstream | 676 | 4563397 ~ 4563605 (-) |
| G459431 | NA | non-coding | upstream | 20301 | 4583022 ~ 4590468 (-) |
| G459447 | NA | non-coding | upstream | 66857 | 4629578 ~ 4631678 (-) |
| G459403 | NA | non-coding | upstream | 72144 | 4634865 ~ 4640115 (-) |
| G459598 | NA | non-coding | upstream | 79582 | 4642303 ~ 4642609 (-) |
| G459011 | NA | other | downstream | 745850 | 3810127 ~ 3816395 (-) |
| CI01000321_03737149_03737996 | TMEM238A | other | downstream | 824260 | 3736456 ~ 3738096 (-) |
| G458957 | NA | other | downstream | 895246 | 3661626 ~ 3666999 (-) |
| G458859 | NA | other | downstream | 1072711 | 3471881 ~ 3489534 (-) |
| G458802 | NA | other | downstream | 1470318 | 3088115 ~ 3091927 (-) |
| G459803 | NA | other | upstream | 456245 | 5018966 ~ 5025886 (-) |
