G459682


Basic Information

Item Value
gene id G459682
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 4846356 ~ 4846583 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU527693
CATTTATTACTCACCCTCATGTCGTTCCACACCCGTAAGACCTTCGTTAATCTTCGGAACACAAATTAAGATATTTTTGTTTAAATCCGATGGCTCAGTGAGGCCTGCATAGCCAGCAATGACATTTCCTCTCTCAAGATCCATTAATGTACTAAAAACATATTTAAATCAGTTCATGTGCATACAGTGGTTCAATATTAATATTATAAAGCAACGAGAATATTTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527693 True 228 lncRNA 0.35 1 4846356 4846583

Neighbor

gene id symbol gene type direction distance location
CI01000321_04774523_04814193 NA coding upstream 32117 4773839 ~ 4814239 (+)
CI01000321_04748037_04748315 DPM3 coding upstream 98038 4747650 ~ 4749579 (+)
CI01000321_04716387_04724423 TRIM46, TRIM46B coding upstream 121590 4716387 ~ 4724766 (+)
CI01000321_04649973_04674616 CHRNA7 coding upstream 171425 4649973 ~ 4674931 (+)
CI01000321_04635524_04639904 RPS27.1, RPS27, RPS27.2, RPS27.L, RPS27L coding upstream 206261 4635524 ~ 4640144 (+)
CI01000321_04859626_04859952 NA coding downstream 12412 4858995 ~ 4860916 (+)
CI01000321_05000584_05005208 NA coding downstream 154001 5000584 ~ 5005379 (+)
CI01000321_05126875_05128453 NA coding downstream 279810 5126393 ~ 5129935 (+)
G459323 NA non-coding upstream 79076 4693614 ~ 4767280 (+)
G459231 NA non-coding upstream 134908 4710432 ~ 4711448 (+)
G459240 NA non-coding upstream 145407 4696671 ~ 4700949 (+)
G459225 NA non-coding upstream 348244 4495458 ~ 4498112 (+)
G459683 NA non-coding downstream 1364 4847947 ~ 4848156 (+)
G459785 NA non-coding downstream 166089 5012672 ~ 5013312 (+)
G459792 NA non-coding downstream 172327 5018910 ~ 5025813 (+)
G459812 NA non-coding downstream 188764 5035347 ~ 5035939 (+)
G459815 NA non-coding downstream 190430 5037013 ~ 5037467 (+)
CI01000321_04515562_04517953 MRPS21 other upstream 328169 4515534 ~ 4518187 (+)
G459303 NA other upstream 357804 4485397 ~ 4488552 (+)
CI01000321_04013470_04014515 CACNG8 other upstream 832690 4013468 ~ 4015412 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other upstream 1043474 3792915 ~ 3805511 (+)

Expression


Co-expression Network