G459785


Basic Information

Item Value
gene id G459785
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 5012672 ~ 5013312 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU527806
ATTTTATATTTATCATTTTTATATCCTTCTTCCTAACTTGATTAGTGAAAAGGTCCCCTAAACTTAATTTGATAAGTGATATACAGATCAATTTGTAATCTCCCTCTAAGATCTTTAACAAATGTACAGTCTTTTTTTTTTTTCAAGAGACCTGTGTCAGTACAGAGAGACAGCTTGAGCGGTAAACATCTTGGATTATTAGTCATTTGACGCAGCTGTTTAATTGAGGTGGGACCGAGGGCTTCTCTGCAGTGAAAGACTGCGAGAGCTGCACAACAAATCAAAATGTGTCATAGAAGCCGATCGGTCTCGCCGGGAACTATGGGGGAGATTCGAGTGATGATGACAACTTATGAAAAACACGGTCTGAATAATGATAAAATGAACCGAGAGGGCAAAAAATAGTATGGAGATGTAGAAAAGAGGATAATAAGACTCAAAAATGGAAAGCAGAAAGAGAAAGCGAAGGGGAAAAAGAGAAAGAATAGGCGCCTTGCAGGGCAGGAAATGCTGGCAGAGAAAAGCAGGAGGGGAGGTGGAGAGAGAAAAAGGGGAGATTGGGAATCATAAAAAGAGGAAAGCGCATTTATAAACACGTCTCTATAGTAACCAACTGGTAATTTGGCTGGTGGGAGAGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527806 True 641 lncRNA 0.40 1 5012672 5013312

Neighbor

gene id symbol gene type direction distance location
CI01000321_05000584_05005208 NA coding upstream 7293 5000584 ~ 5005379 (+)
CI01000321_04859626_04859952 NA coding upstream 151756 4858995 ~ 4860916 (+)
CI01000321_04774523_04814193 NA coding upstream 198433 4773839 ~ 4814239 (+)
CI01000321_04748037_04748315 DPM3 coding upstream 264354 4747650 ~ 4749579 (+)
CI01000321_04716387_04724423 TRIM46, TRIM46B coding upstream 287906 4716387 ~ 4724766 (+)
CI01000321_05126875_05128453 NA coding downstream 113081 5126393 ~ 5129935 (+)
G459683 NA non-coding upstream 164516 4847947 ~ 4848156 (+)
G459682 NA non-coding upstream 166089 4846356 ~ 4846583 (+)
G459323 NA non-coding upstream 245392 4693614 ~ 4767280 (+)
G459231 NA non-coding upstream 301224 4710432 ~ 4711448 (+)
G459240 NA non-coding upstream 311723 4696671 ~ 4700949 (+)
G459792 NA non-coding downstream 5598 5018910 ~ 5025813 (+)
G459812 NA non-coding downstream 22035 5035347 ~ 5035939 (+)
G459815 NA non-coding downstream 23701 5037013 ~ 5037467 (+)
G459818 NA non-coding downstream 27647 5040959 ~ 5041256 (+)
G459819 NA non-coding downstream 29236 5042548 ~ 5042773 (+)
CI01000321_04515562_04517953 MRPS21 other upstream 494485 4515534 ~ 4518187 (+)
G459303 NA other upstream 524120 4485397 ~ 4488552 (+)
CI01000321_04013470_04014515 CACNG8 other upstream 999006 4013468 ~ 4015412 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other upstream 1209790 3792915 ~ 3805511 (+)

Expression


Co-expression Network