Gene
RNA
| Item | Value |
|---|---|
| gene id | G459818 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 5040959 ~ 5041256 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU527844 | True | 298 | lncRNA | 0.43 | 1 | 5040959 | 5041256 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000321_05000584_05005208 | NA | coding | upstream | 35580 | 5000584 ~ 5005379 (+) |
| CI01000321_04859626_04859952 | NA | coding | upstream | 180043 | 4858995 ~ 4860916 (+) |
| CI01000321_04774523_04814193 | NA | coding | upstream | 226720 | 4773839 ~ 4814239 (+) |
| CI01000321_04748037_04748315 | DPM3 | coding | upstream | 292641 | 4747650 ~ 4749579 (+) |
| CI01000321_04716387_04724423 | TRIM46, TRIM46B | coding | upstream | 316193 | 4716387 ~ 4724766 (+) |
| CI01000321_05126875_05128453 | NA | coding | downstream | 85137 | 5126393 ~ 5129935 (+) |
| G459815 | NA | non-coding | upstream | 3492 | 5037013 ~ 5037467 (+) |
| G459812 | NA | non-coding | upstream | 5020 | 5035347 ~ 5035939 (+) |
| G459792 | NA | non-coding | upstream | 15146 | 5018910 ~ 5025813 (+) |
| G459785 | NA | non-coding | upstream | 27647 | 5012672 ~ 5013312 (+) |
| G459683 | NA | non-coding | upstream | 192803 | 4847947 ~ 4848156 (+) |
| G459819 | NA | non-coding | downstream | 1292 | 5042548 ~ 5042773 (+) |
| G459848 | NA | non-coding | downstream | 29547 | 5070803 ~ 5082201 (+) |
| G459843 | NA | non-coding | downstream | 37756 | 5079012 ~ 5153714 (+) |
| G459846 | NA | non-coding | downstream | 58514 | 5099770 ~ 5152925 (+) |
| CI01000321_04515562_04517953 | MRPS21 | other | upstream | 522772 | 4515534 ~ 4518187 (+) |
| G459303 | NA | other | upstream | 552407 | 4485397 ~ 4488552 (+) |
| CI01000321_04013470_04014515 | CACNG8 | other | upstream | 1027293 | 4013468 ~ 4015412 (+) |
| CI01000321_03795430_03804685 | SHISA7B, SHISA7 | other | upstream | 1238077 | 3792915 ~ 3805511 (+) |
