G459819


Basic Information

Item Value
gene id G459819
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 5042548 ~ 5042773 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU527845
GGATTCAAAGGCAGAACACTGAGAATGTGGCGGGGCACTGCTATTTCGTAACACTGTGAAAAAACTGGACAAAGACAATAGAACCCATTATAATCAGTGATAGTGATGCTACACTGGATGCGGCACAACGCAACACAACAAAATTCTACTTCTGTTATGAAGGACAAATGGACTTGCAATGGTCTGTCATGTCCAGTGTAGACAGCTGTTCCAGTTTAAACACGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU527845 True 226 lncRNA 0.43 1 5042548 5042773

Neighbor

gene id symbol gene type direction distance location
CI01000321_05000584_05005208 NA coding upstream 37169 5000584 ~ 5005379 (+)
CI01000321_04859626_04859952 NA coding upstream 181632 4858995 ~ 4860916 (+)
CI01000321_04774523_04814193 NA coding upstream 228309 4773839 ~ 4814239 (+)
CI01000321_04748037_04748315 DPM3 coding upstream 294230 4747650 ~ 4749579 (+)
CI01000321_04716387_04724423 TRIM46, TRIM46B coding upstream 317782 4716387 ~ 4724766 (+)
CI01000321_05126875_05128453 NA coding downstream 83620 5126393 ~ 5129935 (+)
G459818 NA non-coding upstream 1292 5040959 ~ 5041256 (+)
G459815 NA non-coding upstream 5081 5037013 ~ 5037467 (+)
G459812 NA non-coding upstream 6609 5035347 ~ 5035939 (+)
G459792 NA non-coding upstream 16735 5018910 ~ 5025813 (+)
G459785 NA non-coding upstream 29236 5012672 ~ 5013312 (+)
G459848 NA non-coding downstream 28030 5070803 ~ 5082201 (+)
G459843 NA non-coding downstream 36239 5079012 ~ 5153714 (+)
G459846 NA non-coding downstream 56997 5099770 ~ 5152925 (+)
CI01000321_04515562_04517953 MRPS21 other upstream 524361 4515534 ~ 4518187 (+)
G459303 NA other upstream 553996 4485397 ~ 4488552 (+)
CI01000321_04013470_04014515 CACNG8 other upstream 1028882 4013468 ~ 4015412 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other upstream 1239666 3792915 ~ 3805511 (+)

Expression


Co-expression Network