CI01000325_01944358_01986788 (JAG2, JAG2B)


Basic Information

Item Value
gene id CI01000325_01944358_01986788
gene name JAG2, JAG2B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 1944358 ~ 1986788 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_01944358_01986788.mRNA
ATGTGGAATTGTATCAGGATTAGGAATTGGCTCCCAATCGCGTGCCTGCTGTTAACGATATGGACGAAGGTGTCCCATTCCTCTGGCTATTTTGAGCTGCAGCTGATTGCTGTAGAAAATGTAAACGGTGAGTTGTGGGACGGGGAATGTTGCGACGGCACGCGGAACTCTCAAGACCAGCGCTGCGTTCGGGACGAGTGCGATACTTACTTTAAAGTGTGTCTGAAGGAGTACCAGTCTGAAGTCACCACCACTGGCCAGTGCACCTTTGGCTCTGGATCTACAGACGTTCTCGGTGGAAATATAATTTCTTTTAAGACTGCAAAGAACAACAACCCCAGCAAAACGAACGATGTTGGAAAGGTCATCATTCCCTTTCAATTCGCCTGGCCGCGATCCTACACACTCATCCTGGAAGCCTGGGACTGGGATAACTCCACTCAAAACACTGGTGAGGAGAATTTGATCGAACGCACCATTCATGCCAGCATGGTGAATCCCGGTGACCACTGGCAGTCCATCCGGCACCCCGGCACCATAGCCCACATCGAGTACCGCATTCGGGTCAGGTGTGACGAGAACTACTATGGGAGTAAGTGCAACAAACAGTGCCGGCCCCGCGACGACTACTTCGGCCACTACCGCTGCGATCCATCAGGAAATATTGTATGTCTAGATGGCTGGATGGGAGTGGACTGCCGGACGGCGATCTGCAAGCAGGGCTGTAATCTGATTCACGGGGGCTGTGCGGTGCCTGGAGAATGCGAGTGCAACTATGGCTGGCAGGGGGAGTTCTGTGACGAGTGTCTGCCTTACCCTGGCTGCTTGCATGGGACCTGTGTTATGCCCTGGCAGTGCAATTGCGAGAAGAACTGGGGTGGCCTCATGTGCGATAAAGATCTGAACTACTGCGGCACACACCATCCCTGCGTCAATGGTGGGACCTGCATGAACTCTGAACCGAATGAATATAACTGTGCCTGTCCTGAAGGGTACTCTGGCAAGAACTGTGAAATTGCCGAACATGCTTGTGTATCCAACCCCTGTGCGAACGGAGGCACTTGTCATGAAGTCGCCACCGGATTTGAATGCCAGTGTCCACCAGGCTGGGAGGGACCCACTTGTGCTAAAGACATGGATGAATGTGCCTCCAGCCCGTGTGCGCAAGGCGGAACATGTATCGACCTGGAAAATGGCTTTGAGTGTGTCTGCCCTCCTCAGTGGGTTGGGAAGACCTGTCAAATCGATGCAAATGAGTGTATGGGGAAGCCTTGTGTAAATGCTCACTCTTGCAAAAACATGATTGGTGGATATCACTGTGACTGCTTTCAAGGATGGGCCGGACAGAACTGTGACATCAATCTCAATGGCTGCCACGGACAGTGCCAGAATGGAGCAACTTGCAAGGAGCTGGTTAATGGAGGTTACCACTGTCAGTGCCCTACAGGTTTTGTGGGCTTGCACTGTGAATTCTCAAGGAACAAATGTGCCAGCAGTCCGTGTCAAAACGGTGGCCGCTGCCGTGTCATTCTGGACAGCTTTGTTTGTGAATGCCCGCCAAACTATTCAGGGCTGCTGTGTGAGATGGAGAATCTGCCTCACCCAAACCTCTGTGAGCCGAACCCCTGTGAGAATAAGGCTTCGTGCTACAGCCTGCCGGGTGATTTCTACTGTGCCTGTCCTGAAGACTATAAGGGCAAGACCTGTGAAATCCGCAAGGACCACTGCAAGACACCCCCTTGCCAAGTGATTGACAGCTGTACGATTGCTGTGGCGAGTAACAGCTCCGATGGGGGTGTGAGACACATCAACTCTAATGTGTGTGGTCCTCGTGGCCGCTGTATCAGCCTGCCGGGCGGCAACTTCACTTGCACCTGTGAGCATGGCTTTACAGGAGCCTACTGCCACGAGAATATAAATGACTGCGTGAGCAACCCGTGTCGAAACGGAGGCACCTGTATCGACGGGATCAGCTCTTTCCAGTGTTTCTGTCCGGATGGCTGGGAGGGTGACCTCTGTAACCTCAATGTGAACGAGTGCAGTCGGAGCCCTTGTAAGAATGGCGGTCACTGTGTGGACCTGGTCAACGACTTCTACTGTGAATGTGCCAATGGCTGGAAAGGAAAGACCTGTCATTCACGTGAACGACAGTGTGATGCCACCACATGCAGTAATGGAGGGACCTGCTATGACCACGTAGACACTTTCCGCTGCGCCTGCCCTCCTGGATGGGGAGGGAGTACATGCAACACAGCAAAGAACAGCACTTGCGCGTCCAGCCCCTGCCTAAATGGAGGAACATGCGTGGGTGGTGGTGACACGTTCACCTGCATCTGTAAAGACGGCTGGGAGGGGCCCACCTGCGCTCAGAACATCAACGACTGCAACCCTCACCCCTGCTACAATGGAGGAATCTGTGTGGATGGGGTGAACTGGTTCCGTTGTGAATGTGCTCCTGGATTCGCTGGACCCGACTGCCGTATCAACATTGATGAGTGCCAGTCGTCACCCTGCGCCTACGGTGCCACCTGTGTGGATGAGATCAATGGCTTCCGATGTGTCTGCCCACTCGGTCGCACCGGACCTCAATGCCAAGAGTTTATTGGCATTGGGAAGACATGTCACTATGCTGGACTTCAGTTTCCGCATGGCAGCCGCTGGGAGGAAGAATGCAACACTTGCCAGTGTGTCAACGGCAAAGTGGAGTGCACCAAGGTGGTGTGTGGCAGGCGGCCGTGCCTGTTGCCAGGGACGCCAGGACGAGAGCTTCACTCCTGTCCAGGAGGTCGTGAATGCCTGGAGCACAACTTTCTGACGTGCCTCTCTCCCCCTTGCCACCAGTGGGGGTTTTGTTCAAGCCCTGTAGCCGCCCCAACCCTCCAAACCAAATGTGAGCCCAACTCAGTCTATCTGGACAAGAGCTGTGCTCGCATCACCCTTATATTCAACAAGGACAAACTGCCCACAGGAACGACGGTGCAGAATGTCTGCTCAGAGCTGAGGTATATGCCTGCCACACGGAGCCTGGCAAAAGATCATGTGCTGTTGGTTCTTTGTGACCTCTCCTACAAAAACCAAGACGCAGTAGAGGTGGCAATT

Function

symbol description
jag2b Predicted to enable Notch binding activity and calcium ion binding activity. Acts upstream of or within animal organ development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of protein-containing complex. Predicted to be active in plasma membrane. Is expressed in several structures, including anterior neural rod; digestive system; mesoderm; nervous system; and trunk. Orthologous to human JAG2 (jagged canonical Notch ligand 2).
jag2 Enables Notch binding activity and growth factor activity. Involved in regulation of cell population proliferation; spermatogenesis; and thymic T cell selection. Predicted to be located in membrane. Predicted to be integral component of plasma membrane.

GO:

id name namespace
GO:0042127 regulation of cell population proliferation biological_process

KEGG:

id description
K06052 JAG1, CD339; jagged-1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_01944358_01986788.mRNA True 3099 mRNA 0.54 24 1944358 1986788

Neighbor

gene id symbol gene type direction distance location
CI01000325_01914049_01923709 NA coding upstream 19243 1913951 ~ 1925115 (+)
CI01000325_01662729_01717180 BRF1B, BRF1 coding upstream 227178 1662729 ~ 1717180 (+)
CI01000325_01578092_01612984 PPP1R13BB, PPP1R13B coding upstream 331374 1578092 ~ 1612984 (+)
CI01000325_01545056_01547234 RD3L coding upstream 396541 1545056 ~ 1547817 (+)
CI01000325_01511071_01519388 NA coding upstream 424764 1510804 ~ 1519594 (+)
CI01000325_02067666_02085794 ESR2A, ESR2, ERBETA coding downstream 80878 2067666 ~ 2085794 (+)
CI01000325_02211008_02215705 L3HYPDH coding downstream 222830 2209618 ~ 2215814 (+)
CI01000325_02399892_02431492 NA coding downstream 413104 2399892 ~ 2431492 (+)
CI01000325_02484476_02491983 KDR coding downstream 497688 2484476 ~ 2492226 (+)
CI01000325_02618395_02618952 NA coding downstream 630618 2617406 ~ 2619080 (+)
G462919 NA non-coding upstream 7218 1936700 ~ 1937140 (+)
G462782 NA non-coding upstream 43845 1899368 ~ 1900513 (+)
G462797 NA non-coding upstream 49969 1804653 ~ 1894389 (+)
G462860 NA non-coding upstream 153844 1790183 ~ 1790514 (+)
G462857 NA non-coding upstream 158944 1785167 ~ 1785414 (+)
G462938 NA non-coding downstream 23766 2010554 ~ 2011073 (+)
G462949 NA non-coding downstream 40447 2027235 ~ 2027462 (+)
G462951 NA non-coding downstream 42284 2029072 ~ 2029311 (+)
G462966 NA non-coding downstream 60790 2047578 ~ 2047859 (+)
G462969 NA non-coding downstream 63374 2050162 ~ 2050400 (+)
G462778 NA other upstream 47543 1828082 ~ 1896815 (+)
G462730 NA other upstream 324164 1617596 ~ 1620194 (+)
G462928 NA other downstream 13689 2000477 ~ 2000884 (+)
G463566 NA other downstream 576367 2563155 ~ 2563735 (+)
G463724 NA other downstream 741418 2728206 ~ 2728450 (+)
G464950 NA other downstream 3071668 5058456 ~ 5090938 (+)
CI01000325_05549713_05553140 TMEM251 other downstream 3565332 5549713 ~ 5554577 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location