Item | Value |
---|---|
gene id | CI01000325_02399892_02431492 |
gene name | NA |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000325 |
NCBI id | null |
chromosome length | 10587162 |
location | 2399892 ~ 2431492 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0005737 | cytoplasm | cellular_component |
id | description |
---|---|
K02223 | CLOCK, KAT13D; circadian locomoter output cycles kaput protein |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000325_02399892_02431492.mRNA | True | 2697 | mRNA | 0.53 | 20 | 2399892 | 2431492 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000325_02211008_02215705 | L3HYPDH | coding | upstream | 184078 | 2209618 ~ 2215814 (+) |
CI01000325_02067666_02085794 | ESR2A, ESR2, ERBETA | coding | upstream | 314098 | 2067666 ~ 2085794 (+) |
CI01000325_01944358_01986788 | JAG2, JAG2B | coding | upstream | 413104 | 1944358 ~ 1986788 (+) |
CI01000325_01914049_01923709 | NA | coding | upstream | 474777 | 1913951 ~ 1925115 (+) |
CI01000325_01662729_01717180 | BRF1B, BRF1 | coding | upstream | 682712 | 1662729 ~ 1717180 (+) |
CI01000325_02484476_02491983 | KDR | coding | downstream | 52984 | 2484476 ~ 2492226 (+) |
CI01000325_02618395_02618952 | NA | coding | downstream | 185914 | 2617406 ~ 2619080 (+) |
CI01000325_02751187_02751618 | NA | coding | downstream | 318842 | 2750334 ~ 2751683 (+) |
CI01000325_02767014_02793768 | LNX1 | coding | downstream | 334085 | 2762022 ~ 2794226 (+) |
CI01000325_02834936_02881751 | SCFD2 | coding | downstream | 402924 | 2834416 ~ 2882034 (+) |
G463056 | NA | non-coding | upstream | 43491 | 2288334 ~ 2356401 (+) |
G463024 | NA | non-coding | upstream | 190716 | 2208844 ~ 2209176 (+) |
G463001 | NA | non-coding | upstream | 280031 | 2119339 ~ 2119861 (+) |
G462996 | NA | non-coding | upstream | 285498 | 2111486 ~ 2114394 (+) |
G462980 | NA | non-coding | upstream | 329970 | 2069506 ~ 2069922 (+) |
G463080 | NA | non-coding | downstream | 21494 | 2452986 ~ 2453229 (+) |
G463083 | NA | non-coding | downstream | 26614 | 2458106 ~ 2458305 (+) |
G463084 | NA | non-coding | downstream | 27093 | 2458585 ~ 2459161 (+) |
G463087 | NA | non-coding | downstream | 63084 | 2494576 ~ 2494931 (+) |
G463522 | NA | non-coding | downstream | 69689 | 2501181 ~ 2501442 (+) |
G462928 | NA | other | upstream | 399008 | 2000477 ~ 2000884 (+) |
G462778 | NA | other | upstream | 503077 | 1828082 ~ 1896815 (+) |
G462730 | NA | other | upstream | 779698 | 1617596 ~ 1620194 (+) |
G463566 | NA | other | downstream | 131663 | 2563155 ~ 2563735 (+) |
G463724 | NA | other | downstream | 296714 | 2728206 ~ 2728450 (+) |
G464950 | NA | other | downstream | 2626964 | 5058456 ~ 5090938 (+) |
CI01000325_05549713_05553140 | TMEM251 | other | downstream | 3120628 | 5549713 ~ 5554577 (+) |
CI01000325_05655953_05691697 | PRIMA1 | other | downstream | 3223920 | 5654840 ~ 5692630 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
zebrafish (Danio rerio) | XLOC_017283 | clocka | coding | NC_007131.7 | CM002904.2 | 22067337 ~ 22176003 (+) |