CI01000325_02618395_02618952


Basic Information

Item Value
gene id CI01000325_02618395_02618952
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 2617406 ~ 2619080 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_02618395_02618952.mRNA
GTATAAAAGATTAACCTCTATCCAGTAATGGCTCAGGTAGCCTGAAGAGACCATTGAATCATCGGCAGCAGAAAGTTTTGGAAAGGTTCAGTGCCAAGACATAAAATGTCTTTAAAGAGTCTGGACGCTGTTCAGTCAGTAAACTGACGCCAGACTCTTGGTAGGGGGAGCGCAATGGATTGATCGGTTCAGCTTTGTTTGACCAGCAGGTGGAGACACAGTACACATTTTCCCGAACAGACCACCGCAGAGAGTAGAATCAACAGATACAAGCTTTTTCAATGTTCCAAAAGTTAAGAAAAATTTATATTTACATTAGTACTATTTTAACTTTTTTAAATCCTAAAACATACGGATACAGCCAAATATAAATTAGAACAGCTCATATGGATAAGATAAGATAATTGTTCTTACACCGCTTAATCTATGTGATTCTGAGCGGGCATTATGAGGGGTTGACGGTTTCATTTATTTTAAATCTATATATATTTTTTTTTTATCAGTCTAAATTAATAAGCAATTAAATTTATCCATCTGAATTTACCTTTATATTCAAACTTTTTATGAACTATGAGACTAAAGTGCGTAAATAAGAACTACAGTGCTGCAGAAGCACAGTTTGTTGCATTCCGTCTTTGTTCCTGTGAAGTCTCATCACTGGTCTTAAACGCTTGCCTTGCCGAGTTTCTAATCAGACATTCCGCGCGCGCGTGTTTTATCTCTGTCTGTCTAATCCCCAGACCCCTGGGTTCCATCAGCGCTTCAGTAGACAGTCAATGTCACTCAATCTGAAGTGGTCAGCTCTGTTATATTGCAAAACTCAATTATCCTATAAAGAAATGCACCACTTCTTTAACTGGTCCTCTTTAAAATTAATAAAATAAATAAAAAAATAAAAATAAAAATCAAGGTAAATAACTGATGAAAGCATGTCCAGTTAGTTTAAATTGTTTGTGAAGAAATGGTACCGCAAGGTCTACTTCAAAGTGATGGGGAAAAAAACTTTTTACAGCCCAGAGAAGACTGAAGCTCAGCCATTTGCTCATGTCAGCCCTCTCAAGCTCATTATCCTTGTTTGGGAATTCATTGGATTGCCGTGGGAATCAACTCTGGAATGGCAGACGGGTGCGCTTTTGGTACCGCTCATCTGTCCAGCGGTGTCTGGAGCGCAAGTTTCGGCCAGCACCCCCATCACCAGGCGCCCACACACAGATGCGCAACTGGCTGCCAAACACAACCGATCCGCTGCGCTTGACACTCTCGGGCAACAGCTGAACGAGGGGTGTCATCCAACACACGGTTACTCCACGCGTAAAAGCGATTTCCATGGGAATAAAAGAAAGCGGTCTAAAGATAGCCTGTTCCAGCCTGGTTTTAGTCAACGCAACGCAACATGGTCTCCTTGATCCTTGGTAAATACTACCTAAATTGCATTAAGTTAATCCAGATGTGGGAGAAGTTCCCCATTCATGTAGATTCATCATCGACTCGGACTTCAGCGGCAAAGAAGTTTTTCTAAACTCCTCAGTCGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_02618395_02618952.mRNA True 1534 mRNA 0.41 3 2617406 2619080

Neighbor

gene id symbol gene type direction distance location
CI01000325_02484476_02491983 KDR coding upstream 125180 2484476 ~ 2492226 (+)
CI01000325_02399892_02431492 NA coding upstream 185914 2399892 ~ 2431492 (+)
CI01000325_02211008_02215705 L3HYPDH coding upstream 401592 2209618 ~ 2215814 (+)
CI01000325_02067666_02085794 ESR2A, ESR2, ERBETA coding upstream 531612 2067666 ~ 2085794 (+)
CI01000325_01944358_01986788 JAG2, JAG2B coding upstream 630618 1944358 ~ 1986788 (+)
CI01000325_02751187_02751618 NA coding downstream 131254 2750334 ~ 2751683 (+)
CI01000325_02767014_02793768 LNX1 coding downstream 146497 2762022 ~ 2794226 (+)
CI01000325_02834936_02881751 SCFD2 coding downstream 215336 2834416 ~ 2882034 (+)
CI01000325_02897237_02903784 NA coding downstream 276892 2895972 ~ 2903929 (+)
CI01000325_02968026_02987575 NA coding downstream 348946 2968026 ~ 2988001 (+)
G463582 NA non-coding upstream 36260 2580905 ~ 2581146 (+)
G463568 NA non-coding upstream 51636 2565508 ~ 2565770 (+)
G463550 NA non-coding upstream 84352 2530234 ~ 2533054 (+)
G463522 NA non-coding upstream 115964 2501181 ~ 2501442 (+)
G463087 NA non-coding upstream 122475 2494576 ~ 2494931 (+)
G463595 NA non-coding downstream 14560 2633640 ~ 2633870 (+)
G463709 NA non-coding downstream 56716 2675796 ~ 2676280 (+)
G463716 NA non-coding downstream 90197 2709277 ~ 2709656 (+)
G463725 NA non-coding downstream 109699 2728779 ~ 2728979 (+)
G463727 NA non-coding downstream 112419 2731499 ~ 2731721 (+)
G463566 NA other upstream 53671 2563155 ~ 2563735 (+)
G462928 NA other upstream 616522 2000477 ~ 2000884 (+)
G462778 NA other upstream 720591 1828082 ~ 1896815 (+)
G462730 NA other upstream 997212 1617596 ~ 1620194 (+)
G463724 NA other downstream 109126 2728206 ~ 2728450 (+)
G464950 NA other downstream 2439376 5058456 ~ 5090938 (+)
CI01000325_05549713_05553140 TMEM251 other downstream 2933040 5549713 ~ 5554577 (+)
CI01000325_05655953_05691697 PRIMA1 other downstream 3036332 5654840 ~ 5692630 (+)
G466144 NA other downstream 3879686 6498766 ~ 6501978 (+)

Expression


Co-expression Network