CI01000325_02897237_02903784


Basic Information

Item Value
gene id CI01000325_02897237_02903784
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 2895972 ~ 2903929 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_02897237_02903784.mRNA
CCATAAAAGGCCCCGTTTCCCACTATCTTACCCCAGAGTCCCTGCTGCCCTGAGGGCCATAGAAGGGCTCCATTGTGTGGAGAAAGGCACCTGGTTTTGGTTAGTGCCAAACTGGATACACTCTCACACACACTCACAGTAACACACACAGCAGGGTCAGCTCCCTCTAGAGGCCCATCTGGAGTTAATTTCCTGTCAGAGACAGCAAGCCATTACAGGCGTGGTCTGGCAGCCACTTGTGATTGGATGAGAGACAAAGGGTGGAGCAAAACTACACGGTCATTTCGATTATTGGCTTATTTGCTTTCTTTTTAGGAATTTTGTGCAATTTCGAGTGTTTACATTGCATGCATTACAGCATTACATTTACATTGCATGTTTTATCATTTGTATAGAGTGCAACAGTCGGGTTCTGGAAGTAAAACTCCCGATTCATTTTCTCCGTAAAGGAATTGGTTTTGAGCGATAACCTTTAAAGACAGACCTACTGTGAGCAAAGAGGTTGTTAATTGATGATATATGCTTTTTGTTGAAGCCATCAGTCTGCATTATTTCAGCTTATTGTTCAAACAATCATATGTAACAGTTGAATTCCTCTTGAAAAACTACATTACCCATGATTCTGCAGAGAAATCTCCACCAATTTGAGAATGTTAGTGTCGGCCACTCCCATTCAGCATTGTGAATGATGTAGTTAGTTTCCCTATACTCTCAAACATATATTTGTACGCATTACATGCATATTTTGCAATAACCGTAAAGTATTTTGTTTGTGTTTATATATATATATATATATATAATATTATGTATGTGTGTGTGTGCATTTTTTTTTTTTTTTTGAGAAAGTAAAAATGTGCACAGTTTCCTGTGATGGGTAGGTTTAGGGGTAAGGTTGGTGTAGGGCAATAGAAAATACGGTTTGTACAGTATAAAAACCATTACGCCTATGGAATGTCCCCACAATTCAAAAAAACAAACGTGTGTGTGTGTGTCATTCGCGACGCTTCATGGGTTCGTTCTCTTATTAAAGCCGTTAAGTAAACAGTCCTTTACCTTTGTCTTTATGTCTGATTTTCAAATACTTTTTTTGCTTCAAATCAGTTTGCAGTGTTGTGATTCACCTTGTAGCTGGTTGGTTTGGTTCATGGCTTATAACTCTTAAATGAAGACTTTTTTAGAATCCTTATTTGAAAAATGAATTGGAAAAATACTTGCGGAACCAAGGTTGCTGAAAAAGTGGATGGGCACTTGCACTCTATTCTAAAATGGCCAATTTCCCCTCAGAAATCTGTGAATCTCTTGGGCTAAAACGATTACTGCTGCAGACCAGTGATATCACTTATATTATCACAGTCCAAAAAGTCATGAGAAAAGTGGACATTCTACATTCTACAATCAGATTTTTTGATCAGTCTGATGAGAAATCTCATCCACTAAAGCGGGCCTTGGGGGACTCCGACCTGGCAGAGGTTCTGAAACAACTTCTTCCCCTCATAAAGTCCAGTGAGTCTGGAACAGGTTCTGACTCTAACTCTGGCTCTGGTGAGCTGAGCATGGATGATCTTCTGGTGCTGCTGGTTTATGTGTACTCTATGGCCCAGGAAGCATGTCCGGGTGGTGCTGACGAGGAAAAGCATGTGGAGAAGGTGGAGAAGGAATTGATTGGCGCATTGACACTCCTACTCACCCGGCAGACCACATTAAGCCATCTGCTGCAGGAGATCACAGGTCAGTGGTGGAATACTAGTTCAACATGATCCCAGTACCATTATACTAAGTCAGTTAGTTAGTAATGATATACTGTCACTGAGTTTCCACATCATTGAGTGACTTCATGAAGCTGTCATGCCTATAATCTCTGTGTAGCACACTAGTGATTAGTGCTGGAATATTTAAACAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_02897237_02903784.mRNA True 1902 mRNA 0.40 3 2895972 2903929

Neighbor

gene id symbol gene type direction distance location
CI01000325_02834936_02881751 SCFD2 coding upstream 13938 2834416 ~ 2882034 (+)
CI01000325_02767014_02793768 LNX1 coding upstream 101746 2762022 ~ 2794226 (+)
CI01000325_02751187_02751618 NA coding upstream 144289 2750334 ~ 2751683 (+)
CI01000325_02618395_02618952 NA coding upstream 276892 2617406 ~ 2619080 (+)
CI01000325_02484476_02491983 KDR coding upstream 403746 2484476 ~ 2492226 (+)
CI01000325_02968026_02987575 NA coding downstream 64097 2968026 ~ 2988001 (+)
CI01000325_03041882_03051690 USP46 coding downstream 137953 3041882 ~ 3051927 (+)
CI01000325_03097491_03100127 SGCB coding downstream 193562 3097491 ~ 3100321 (+)
CI01000325_03102298_03105905 NA coding downstream 198369 3102298 ~ 3105905 (+)
CI01000325_03106141_03113715 NA coding downstream 202212 3106141 ~ 3114110 (+)
G463731 NA non-coding upstream 153070 2742648 ~ 2742902 (+)
G463727 NA non-coding upstream 164251 2731499 ~ 2731721 (+)
G463725 NA non-coding upstream 166993 2728779 ~ 2728979 (+)
G463716 NA non-coding upstream 186316 2709277 ~ 2709656 (+)
G463709 NA non-coding upstream 219692 2675796 ~ 2676280 (+)
G463771 NA non-coding downstream 128481 3032410 ~ 3033231 (+)
G463773 NA non-coding downstream 155856 3059785 ~ 3060011 (+)
G463776 NA non-coding downstream 182733 3086662 ~ 3086962 (+)
G463777 NA non-coding downstream 188697 3092626 ~ 3092833 (+)
G463778 NA non-coding downstream 191024 3094953 ~ 3095183 (+)
G463724 NA other upstream 167522 2728206 ~ 2728450 (+)
G463566 NA other upstream 332237 2563155 ~ 2563735 (+)
G462928 NA other upstream 895088 2000477 ~ 2000884 (+)
G462778 NA other upstream 999157 1828082 ~ 1896815 (+)
G462730 NA other upstream 1275778 1617596 ~ 1620194 (+)
G464950 NA other downstream 2154527 5058456 ~ 5090938 (+)
CI01000325_05549713_05553140 TMEM251 other downstream 2648191 5549713 ~ 5554577 (+)
CI01000325_05655953_05691697 PRIMA1 other downstream 2751483 5654840 ~ 5692630 (+)
G466144 NA other downstream 3594837 6498766 ~ 6501978 (+)
G466137 NA other downstream 3713271 6617200 ~ 6619471 (+)

Expression


Co-expression Network