CI01000325_05549713_05553140 (TMEM251)


Basic Information

Item Value
gene id CI01000325_05549713_05553140
gene name TMEM251
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 5549713 ~ 5554577 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_05549713_05553140.mRNA
ATGAGGCAAGAGGACATGAGGAGATGTGGAAGCCTTATATCCAAATGGTCTGTCCATTACTTAGCAATGCTGTCGATTAGCGATGTAATGTTGATTGGCCATTTGGGCAGCAACGAAACTTGCTTGCCCAGACACACCCTCTTTCAGAGGCGGGCTTATGAAACATATTGCCCTGAAAACCGCGCAAAATGGATTGATCGTGTGATCACTAGAAGAGCATGGAGAATGATGAATTTCCGCCAGCGGATGGGGTGGATAGGTGTCGGACTGTACTTGTTAGCCAGTGTCGCTGCTGTGTATTATATATTTGAGATCAGCCAAACGTACAACCGACTTGCACTGGCACAAGTAGAAAAGGCATCTGGAGTGGAGACAAAATGGTCGGGAGATGCTTCTTCCTCTTCCCCTTCTTCAGCCTCATGGACAGTGACTCTGAAAACGAGACTTCTCCTCCTGCCCTTCTGGGTGTGGGCCACCATTTTCCTCATTCCCTACCTCCAGGTGTTTCTCTTTCTATACTCCTGCACCAGGGCGGACCCCAAGACTGTAGGATACTGTATTCTGCCCATCTGCCTTGCTGTTCTCTGCAACCGTCACCAAACCTTCGCCAAGGCCTCCAATCAGATTAGCAGGCTGCAGCTGATTGACACTTGAAGTGATTGTTAAAGATGTGGGATCAGATCTTGGTGCCATACGTTTGGGCGACTACAAAAGTGCATTCATATATAAGATTATTATTTTTTATGACTTGGCCCTGACTTTTTTTGTTTTTGTAGGAA
>TU533890
ATTCCAGGAAGTGAGTCCTATGACAACAATCCTGTGACAGCGTTGTGTGTTTTGGCTTGAGAAACATATTGCCCTGAAAACCGCGCAAAATGGATTGATCGTGTGATCACTAGAAGAGCATGGAGAATGATGAATTTCCGCCAGCGGATGGGGTGGATAGGTGTCGGACTGTACTTGTTAGCCAGTGTCGCTGCTGTGTATTATATATTTGAGATCAGCCAAACGTACAACCGACTTGCACTGGCACAAGTAGAAAAGGCATCTGGAGTGGAGACAAAATGGTCGGGAGATGCTTCTTCCTCTTCCCCTTCTTCAGCCTCATGGACAGTGACTCTGAAAACGAGACTTCTCCTCCTGCCCTTCTGGGTGTGGGCCACCATTTTCCTCATTCCCTACCTCCAGGTGTTTCTCTTTCTATACTCCTGCACCAGGGCGGACCCCAAGACTGTAGGATACTGTATTCTGCCCATCTGCCTTGCTGTTCTCTGCAACCGTCACCAAACCTTCGCCAAGGCCTCCAATCAGATTAGCAGGCTGCAGCTGATTGACACTTGAAGTGATTGTTAAAGATGTGGGATCAGATCTTGGTGCCATACGTTTGGGCGACTACAAAAGTGCATTCATATATAAGATTATTATTTTTTATGACTTGGCCCTGACTTTTTTTGTTTTTGTAGGAAATAAATGGGGACGGTGCTTGGGATTCCTTTTTTTTTTTGTAATGTTTTTCTTTTTCTTGAGTTTAACAACTAATTGTTTGAGTCACTTGCAGTTCCACACCAGTTTTTGTGTATTTTAGCAAAAACTGGATTATAGGCTAGCGAGGTTTCAAACTCTTTCAAACTGAATGGCAAAATCGGTCCGCATTTTAATCAAAGTAGACTTATAATAGGATCCAGAAGTATTTTCCATGTTGGCTCAGTCTTACAGTACCGTTTTTAGAAGCTTTGTCTTGATTTAACTGAAAAAAAAAAAAATAAGTTTGATATAAGAAATTAAGCCATAGTCCAAGATGTGGAGAATGTTGATGGGGCTGCATGAACTACTTGAATTACACTTCTAATGATGGGTAGATTTCCTATAAATCAAGATGAATAAAGATTTGTCAGTGCAGACAAGTGTTAATGTTTCCATAGTATGAGGGCAATGGATTTTTAGTGTCACTTTAATGCTCTAGCTGTTTGTTCTTGACTCCAATGGACATTGTATTAGAGGAAAATAAGAAAACCACTGACAGTGGTGCCACATTTCCCATTTGTTTATAAGTGTCCATCTTATTTGTTTTGAATAGAAAATGCAATCAAGGAAAGAAGTTGTAATAAGAAAACTTTTGTATTAAAATCTGTGATGAATACATTTTAATATCAGTATTTTATGTTCAAGTATGATTTCTTGTCAGCTCTAGAAATGGAAAGGGAGTGTTTTCCTTTTATTTCTTAATTTGTGTTTATTTGACAAATACTAATTATGTATCAGTGATAATCAAGTGTCTTCAGAGAAAAGACATCTGTGTTTCGGAAAACAATTTCATATTTATGTCTTGTGGAATAGTGCACTCAATCTCATGTCTTATTGTTGAGGGATATCAGCATAATTTTACAGTGTGAATAATCTTATCTTGCATAAGAAATGCAAAGGTTATTTAGACTTGCTGGGTGTGGTAGGTTGTAATGAATCTGGCACAAGACTAATATAACCATGGGTCTTAATTTTAGATGAGCCTGTGCCACAGACCCAAGTGTTTCAATCTTTAAAATCACTTCTTTTGTGGCGACAATGCCGTTGGTTATATATGTGGATGGTTTTATTAATTTGTTGAAAAGTTTTAAAAAAGGCAAATTGTTTTTGTCTAAAAGGGCTTGACTATGAATTTATAATGATAATGTTTAATGGGTACTTGTTAATAACTTTCCATTGCAATCTTAATACACTGGTTTAAAACAACTCTGGATTCTGACAAAAAAAAAAACAATAAAGAAATGTAATGTGCAG

Function

symbol description
tmem251 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM251 (transmembrane protein 251).

GO:

id name namespace
GO:0008150 biological_process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_05549713_05553140.mRNA False 779 mRNA 0.47 4 5549713 5553265
TU533890 True 1992 TUCP 0.37 2 5552120 5554577

Neighbor

gene id symbol gene type direction distance location
CI01000325_05526039_05530187 NA coding upstream 19526 5526039 ~ 5530187 (+)
CI01000325_05510163_05515246 NA coding upstream 34141 5510163 ~ 5515572 (+)
CI01000325_05498301_05508208 SEL1L coding upstream 41180 5498301 ~ 5508533 (+)
CI01000325_05493231_05497044 AHSA1A coding upstream 52285 5493027 ~ 5497428 (+)
CI01000325_05477140_05488755 NA coding upstream 60590 5476425 ~ 5489123 (+)
CI01000325_05556137_05564928 UBR7 coding downstream 2872 5556137 ~ 5565039 (+)
CI01000325_05605406_05607986 NA coding downstream 51985 5605250 ~ 5608429 (+)
CI01000325_05626291_05627850 NA coding downstream 73026 5626212 ~ 5628157 (+)
CI01000325_05655953_05691697 PRIMA1 coding downstream 101575 5654840 ~ 5692630 (+)
CI01000325_05740859_05742551 NA coding downstream 187327 5740592 ~ 5743948 (+)
G465175 NA non-coding upstream 96967 5445560 ~ 5452746 (+)
CI01000325_05257907_05258833 FOXQ1B non-coding upstream 290437 5256693 ~ 5259276 (+)
G465042 NA non-coding upstream 659119 4890380 ~ 4890594 (+)
G464953 NA non-coding upstream 778407 4763545 ~ 4771306 (+)
G465028 NA non-coding upstream 808015 4741499 ~ 4741698 (+)
G465251 NA non-coding downstream 13086 5566351 ~ 5566593 (+)
G465723 NA non-coding downstream 85953 5639218 ~ 5639651 (+)
G465726 NA non-coding downstream 100794 5654059 ~ 5654334 (+)
G465732 NA non-coding downstream 109786 5663051 ~ 5714405 (+)
G464950 NA other upstream 458775 5058456 ~ 5090938 (+)
G463724 NA other upstream 2821263 2728206 ~ 2728450 (+)
G463566 NA other upstream 2985978 2563155 ~ 2563735 (+)
G462928 NA other upstream 3548829 2000477 ~ 2000884 (+)
G462778 NA other upstream 3652898 1828082 ~ 1896815 (+)
G466144 NA other downstream 945501 6498766 ~ 6501978 (+)
G466137 NA other downstream 1063935 6617200 ~ 6619471 (+)
G466236 NA other downstream 1450352 7003617 ~ 7004655 (+)
G466227 NA other downstream 1758818 7312083 ~ 7314812 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017360 tmem251 coding NC_007131.7 CM002904.2 27087539 ~ 27090853 (+)