Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000325_05626291_05627850 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000325 |
| NCBI id | null |
| chromosome length | 10587162 |
| location | 5626212 ~ 5628157 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| id | name | namespace |
|---|---|---|
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000325_05626291_05627850.mRNA | False | 376 | mRNA | 0.52 | 2 | 5626291 | 5627963 |
| TU534577 | True | 649 | lncRNA | 0.45 | 2 | 5626212 | 5628157 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000325_05605406_05607986 | NA | coding | upstream | 17862 | 5605250 ~ 5608429 (+) |
| CI01000325_05556137_05564928 | UBR7 | coding | upstream | 61252 | 5556137 ~ 5565039 (+) |
| CI01000325_05549713_05553140 | TMEM251 | coding | upstream | 73026 | 5549713 ~ 5554577 (+) |
| CI01000325_05526039_05530187 | NA | coding | upstream | 96104 | 5526039 ~ 5530187 (+) |
| CI01000325_05510163_05515246 | NA | coding | upstream | 110719 | 5510163 ~ 5515572 (+) |
| CI01000325_05655953_05691697 | PRIMA1 | coding | downstream | 26877 | 5654840 ~ 5692630 (+) |
| CI01000325_05740859_05742551 | NA | coding | downstream | 112629 | 5740592 ~ 5743948 (+) |
| CI01000325_05765629_05781041 | PPP4R4 | coding | downstream | 137666 | 5765629 ~ 5781456 (+) |
| CI01000325_05793873_05794963 | TMEM179 | coding | downstream | 165910 | 5793873 ~ 5795113 (+) |
| CI01000325_05806682_05840917 | NA | coding | downstream | 178719 | 5806682 ~ 5840917 (+) |
| G465251 | NA | non-coding | upstream | 59698 | 5566351 ~ 5566593 (+) |
| G465175 | NA | non-coding | upstream | 173545 | 5445560 ~ 5452746 (+) |
| CI01000325_05257907_05258833 | FOXQ1B | non-coding | upstream | 367015 | 5256693 ~ 5259276 (+) |
| G465042 | NA | non-coding | upstream | 735697 | 4890380 ~ 4890594 (+) |
| G464953 | NA | non-coding | upstream | 854985 | 4763545 ~ 4771306 (+) |
| G465723 | NA | non-coding | downstream | 11255 | 5639218 ~ 5639651 (+) |
| G465726 | NA | non-coding | downstream | 26096 | 5654059 ~ 5654334 (+) |
| G465732 | NA | non-coding | downstream | 35088 | 5663051 ~ 5714405 (+) |
| G465922 | NA | non-coding | downstream | 264268 | 5892231 ~ 5892582 (+) |
| G465958 | NA | non-coding | downstream | 282440 | 5910403 ~ 5910690 (+) |
| G464950 | NA | other | upstream | 535353 | 5058456 ~ 5090938 (+) |
| G463724 | NA | other | upstream | 2897841 | 2728206 ~ 2728450 (+) |
| G463566 | NA | other | upstream | 3062556 | 2563155 ~ 2563735 (+) |
| G462928 | NA | other | upstream | 3625407 | 2000477 ~ 2000884 (+) |
| G466144 | NA | other | downstream | 870803 | 6498766 ~ 6501978 (+) |
| G466137 | NA | other | downstream | 989237 | 6617200 ~ 6619471 (+) |
| G466236 | NA | other | downstream | 1375654 | 7003617 ~ 7004655 (+) |
| G466227 | NA | other | downstream | 1684120 | 7312083 ~ 7314812 (+) |
