CI01000325_05740859_05742551


Basic Information

Item Value
gene id CI01000325_05740859_05742551
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 5740592 ~ 5743948 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_05740859_05742551.mRNA
CTTTATAAAGAAATTCTTTTACCTGGTCTTGCTGTTCTTTACTTAGGTGGCTAAGACCAACTGGAGGCCCAGACAGGGAGTCCATATTGTCAACTTCCATAGTGAAGGTTTGAAAGTCAGCTGAATCTGTTTAAATTACTTTTCTGACTTGTCTGAATGCTCCCTAGTACAGTCTTTTGGGGCAATGTGATGCTATGCATGGTTTATTGCACAGGAGTTTGAACATATGGATTCTGTAGATTTGGACTTTTCAAAATTCCCTCGGCAATGACCAACAAGTCCAACTTTGCACACTCCATGATAGGTTCAAACAGTACCACAGAGCTGTTCCTGTGGGTCAATAATCTCTGTGAGCGGATGAAGCTTTGTGTGAGTCTTGGCATTGTGATTGTCACTGTCTTTGAAAAAGAAGTCTACATGAAGAGGATTATGGTTGGGATCTTGACCTGCATTGATGTTGTGGTTGATACTAGGTCTGAGACTGCACCTGTGTGTTCAGCTTGTACAGTGGCATGGCAGATGGCCGAACATGCGGTACAGGAACTGCTGTGGTGTCTCATGTTCATGCTGCTTGGCACTCATAAGTTCCTGGAAAAGTTCAGTACTGCTGCTTTCACCTAGATGAGACTGGAGAAAACTTTTCAATTCTGCAACAGTAATGTCATCCTTGTTTATTACCATATCTTTAAAATTTCCAGGTTTAATTATGCAGAACACCCCTCGGATTATCTCGCTTTCAGTGTAACCTTCCTTAATGCCTTCATCTATTTACTTGGACAGGTTGCAGAGACGCCAGGCACACTGTCTCCTATTTGTCCCCCGTGGATCTTGAATTCTTGATGTTGCAACACTGTGTTGTCTCTGATGGAGACCAAGGTGTCAGGTACAAAATAACTTACAAAATAAGTGTTGTGGCCGCTGAATTCCTGCCTTGGAATGCTGGAATATACATGGTTTAGTATTGTTTGGAAGTGATTTTGTGCGACATGACTGTGTTTTCTACCTAACTAAAAGTTTGAAAACATTCTCTGGTACTCAACCTCTGAGGTGTCTGTGTTATGAGGTGCAGTGTGATTGCTGTGCAAGCATTTCAGTCCTAGTAACACTTTGTTCTACAATTTCATCAATACAATCATTTAAATTCAATAGCACAGTCATTCCTTGGCCAGGTAGTCTAGATAATTCACTATTCATGTAAGTTATAATATAATTAATGTAGCACTCTTTGTCTCCATTCAATTCACCTCCACTTAATCAAGGCACTCTTCTTTAAAACATGATGATGTTTCATTTCACGTTGTACTTGCATCAACTCTTGTATTGAGCTATTTGGTCCACAACCATTATTCAAACAGCGACTGATTTGGCACTCATTCCCTTTCTATGAAACCTGTTAAAATGCATTTGCTGGTTCTAACTCTTGCCTGAGCACTGTAATTATTTCTCTTTTACTACTACAGTTTTTTGCATCTGTCCTTGTTGTGGAGAAAAGTCTTTGTACCTTACTTAGCCCTAAATGGTACATATTAGTGCCTTAAAGGTACATATTATTACTTTAAAAGTGCATATTAGTACCTTTTCACCCTTACAGAAGCAGATATGAAGCAAATCTTCTACTGTTTGAAGTTCTCCGGGTTCTCACCAGAACGCTGAATAGGGAGCGGCGAAGAAGTGTCATCACTTGAAGCAATGACTTGACGGTGAAAGATAGGCTTCTGACTTGCGTTGTGCAGGAGAAAGACTTAGGTGCCGCCTTACATAGGGAGCAATTCCGTCTCTAATTTGTGTGCTTGAATGCCATTGTTGTGTGCTTGAATGCCATTGGCAATTGCAATGCAATGCTGTTATTGCAATAAGGCTTCAGTATTTCTAGGAGATGTGTTTTTCCATAGCGTCAATCTGACGCAACGTCGAGAGACCGATATCAAAAAGGAACACCACAAACTTACAGGAATACTGGCGAGTTACACAAAGCTCTATAATATGACAGGTTACATCAATGTTAAGTAATTTACAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC103460861

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_05740859_05742551.mRNA True 2018 mRNA 0.40 4 5740592 5743948

Neighbor

gene id symbol gene type direction distance location
CI01000325_05655953_05691697 PRIMA1 coding upstream 48527 5654840 ~ 5692630 (+)
CI01000325_05626291_05627850 NA coding upstream 112629 5626212 ~ 5628157 (+)
CI01000325_05605406_05607986 NA coding upstream 132163 5605250 ~ 5608429 (+)
CI01000325_05556137_05564928 UBR7 coding upstream 175553 5556137 ~ 5565039 (+)
CI01000325_05549713_05553140 TMEM251 coding upstream 187327 5549713 ~ 5554577 (+)
CI01000325_05765629_05781041 PPP4R4 coding downstream 21681 5765629 ~ 5781456 (+)
CI01000325_05793873_05794963 TMEM179 coding downstream 49925 5793873 ~ 5795113 (+)
CI01000325_05806682_05840917 NA coding downstream 62734 5806682 ~ 5840917 (+)
CI01000325_05852745_05882303 KIF26AA coding downstream 108574 5852522 ~ 5882681 (+)
CI01000325_05941338_05958627 NA coding downstream 197390 5941338 ~ 5959001 (+)
G465732 NA non-coding upstream 26187 5663051 ~ 5714405 (+)
G465726 NA non-coding upstream 86258 5654059 ~ 5654334 (+)
G465723 NA non-coding upstream 100941 5639218 ~ 5639651 (+)
G465251 NA non-coding upstream 173999 5566351 ~ 5566593 (+)
G465922 NA non-coding downstream 148283 5892231 ~ 5892582 (+)
G465958 NA non-coding downstream 166455 5910403 ~ 5910690 (+)
G465979 NA non-coding downstream 400059 6144007 ~ 6144156 (+)
G466010 NA non-coding downstream 444632 6188580 ~ 6188819 (+)
G466011 NA non-coding downstream 445275 6189223 ~ 6189915 (+)
G464950 NA other upstream 649654 5058456 ~ 5090938 (+)
G463724 NA other upstream 3012142 2728206 ~ 2728450 (+)
G463566 NA other upstream 3176857 2563155 ~ 2563735 (+)
G466144 NA other downstream 754818 6498766 ~ 6501978 (+)
G466137 NA other downstream 873252 6617200 ~ 6619471 (+)
G466236 NA other downstream 1259669 7003617 ~ 7004655 (+)
G466227 NA other downstream 1568135 7312083 ~ 7314812 (+)
G466219 NA other downstream 1738088 7482036 ~ 7486407 (+)

Expression


Co-expression Network