G462857


Basic Information

Item Value
gene id G462857
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 1785167 ~ 1785414 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU531345
CAGGCATGCATACAAGCACGTGGGGGCCATACAAACTACTGAGTACCATTTTGAGTTGCTGCGATGAAATTTCAGCAAAATGGACTAGCCTGCTGCATCATTTTTTCACTTTGATTTTCGGGGTGTCTTTGAATTCAGTCCTCTGTAGGTTGATAATTTTCATTTCCATCAAACGATGTGGCATCCTTTCGTTCCTAACACATTACCCAGTCCATACCAGTATAGATATCCAGCATGATATTTTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU531345 True 248 lncRNA 0.41 1 1785167 1785414

Neighbor

gene id symbol gene type direction distance location
CI01000325_01662729_01717180 BRF1B, BRF1 coding upstream 67987 1662729 ~ 1717180 (+)
CI01000325_01578092_01612984 PPP1R13BB, PPP1R13B coding upstream 172183 1578092 ~ 1612984 (+)
CI01000325_01545056_01547234 RD3L coding upstream 237350 1545056 ~ 1547817 (+)
CI01000325_01511071_01519388 NA coding upstream 265573 1510804 ~ 1519594 (+)
CI01000325_01458776_01502995 RTN1B coding upstream 282172 1458548 ~ 1502995 (+)
CI01000325_01914049_01923709 NA coding downstream 128537 1913951 ~ 1925115 (+)
CI01000325_01944358_01986788 JAG2, JAG2B coding downstream 158944 1944358 ~ 1986788 (+)
CI01000325_02067666_02085794 ESR2A, ESR2, ERBETA coding downstream 282252 2067666 ~ 2085794 (+)
CI01000325_02211008_02215705 L3HYPDH coding downstream 424204 2209618 ~ 2215814 (+)
CI01000325_02399892_02431492 NA coding downstream 614478 2399892 ~ 2431492 (+)
G462854 NA non-coding upstream 3565 1781356 ~ 1781602 (+)
G462787 NA non-coding upstream 34810 1750113 ~ 1750357 (+)
G462774 NA non-coding upstream 37840 1747048 ~ 1747327 (+)
G462781 NA non-coding upstream 38335 1746443 ~ 1746832 (+)
G462789 NA non-coding upstream 161416 1623265 ~ 1623751 (+)
G462860 NA non-coding downstream 4769 1790183 ~ 1790514 (+)
G462797 NA non-coding downstream 19239 1804653 ~ 1894389 (+)
G462782 NA non-coding downstream 113954 1899368 ~ 1900513 (+)
G462738 NA non-coding downstream 131669 1917083 ~ 1962495 (+)
G462919 NA non-coding downstream 151286 1936700 ~ 1937140 (+)
G462730 NA other upstream 164973 1617596 ~ 1620194 (+)
G462778 NA other downstream 42668 1828082 ~ 1896815 (+)
G462928 NA other downstream 215063 2000477 ~ 2000884 (+)
G463566 NA other downstream 777741 2563155 ~ 2563735 (+)
G463724 NA other downstream 942792 2728206 ~ 2728450 (+)
G464950 NA other downstream 3273042 5058456 ~ 5090938 (+)

Expression


Co-expression Network