G463024


Basic Information

Item Value
gene id G463024
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 2208844 ~ 2209176 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU531528
TATTGGATAGGAAATGACATACATGCTGTCCTCGGTGGAGGGCTTGAGCTCGAGACTTGAGCCGAGGCCTAAAGTCCAACCCCAACCTGACAGGGAACTCAGAGCCTGTCCATGTCCGAGCAAGAACACGAGAGACATCATCAAGTCATCACAGCCACATTTGCTTTGTTTTGAAAGTCATTTTGCTTTGTTTTTAAAAGTCAAGACAAGTCATCTTTATTTATATAGTGCTTTTTATAAGACCAATCTGTATATATGTATATATCATTTGAATAAATGAAATTCTTTTAAACCGTCACGGCCTATGAGAATCCTTTGAAGTGAAAAGGCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU531528 True 333 lncRNA 0.39 1 2208844 2209176

Neighbor

gene id symbol gene type direction distance location
CI01000325_02067666_02085794 ESR2A, ESR2, ERBETA coding upstream 123050 2067666 ~ 2085794 (+)
CI01000325_01944358_01986788 JAG2, JAG2B coding upstream 222056 1944358 ~ 1986788 (+)
CI01000325_01914049_01923709 NA coding upstream 283729 1913951 ~ 1925115 (+)
CI01000325_01662729_01717180 BRF1B, BRF1 coding upstream 491664 1662729 ~ 1717180 (+)
CI01000325_01578092_01612984 PPP1R13BB, PPP1R13B coding upstream 595860 1578092 ~ 1612984 (+)
CI01000325_02211008_02215705 L3HYPDH coding downstream 442 2209618 ~ 2215814 (+)
CI01000325_02399892_02431492 NA coding downstream 190716 2399892 ~ 2431492 (+)
CI01000325_02484476_02491983 KDR coding downstream 275300 2484476 ~ 2492226 (+)
CI01000325_02618395_02618952 NA coding downstream 408230 2617406 ~ 2619080 (+)
CI01000325_02751187_02751618 NA coding downstream 541158 2750334 ~ 2751683 (+)
G463001 NA non-coding upstream 88983 2119339 ~ 2119861 (+)
G462996 NA non-coding upstream 94450 2111486 ~ 2114394 (+)
G462980 NA non-coding upstream 138922 2069506 ~ 2069922 (+)
G462972 NA non-coding upstream 156285 2052138 ~ 2052559 (+)
G462971 NA non-coding upstream 156709 2051818 ~ 2052135 (+)
G463056 NA non-coding downstream 79158 2288334 ~ 2356401 (+)
G463080 NA non-coding downstream 243810 2452986 ~ 2453229 (+)
G463083 NA non-coding downstream 248930 2458106 ~ 2458305 (+)
G463084 NA non-coding downstream 249409 2458585 ~ 2459161 (+)
G463087 NA non-coding downstream 285400 2494576 ~ 2494931 (+)
G462928 NA other upstream 207960 2000477 ~ 2000884 (+)
G462778 NA other upstream 312029 1828082 ~ 1896815 (+)
G462730 NA other upstream 588650 1617596 ~ 1620194 (+)
G463566 NA other downstream 353979 2563155 ~ 2563735 (+)
G463724 NA other downstream 519030 2728206 ~ 2728450 (+)
G464950 NA other downstream 2849280 5058456 ~ 5090938 (+)
CI01000325_05549713_05553140 TMEM251 other downstream 3342944 5549713 ~ 5554577 (+)
CI01000325_05655953_05691697 PRIMA1 other downstream 3446236 5654840 ~ 5692630 (+)

Expression


Co-expression Network