G463522


Basic Information

Item Value
gene id G463522
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 2501181 ~ 2501442 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU532089
CAACCCAGGAAGAAGCTCGTTGTAGTCCCTACCAGCTGTTTGTTGTAGTCCTTAAACAGCGAATTCTCTAAAAGAAAATATCTTCCTTTGCATTGAACTTTGAGCGTCGTAACTTTGCAGATGTTGTTTATGCTCAAACAGCAACATTACACACTAACTAAAGTTAAAAAAAGTGAAATCATAATGAACCACCACTTCAAATAAAAAAACAAAAACATATAACTCATACACACTGCCCCGCCAAAAAAAAAGGTCACTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532089 True 262 lncRNA 0.36 1 2501181 2501442

Neighbor

gene id symbol gene type direction distance location
CI01000325_02484476_02491983 KDR coding upstream 8955 2484476 ~ 2492226 (+)
CI01000325_02399892_02431492 NA coding upstream 69689 2399892 ~ 2431492 (+)
CI01000325_02211008_02215705 L3HYPDH coding upstream 285367 2209618 ~ 2215814 (+)
CI01000325_02067666_02085794 ESR2A, ESR2, ERBETA coding upstream 415387 2067666 ~ 2085794 (+)
CI01000325_01944358_01986788 JAG2, JAG2B coding upstream 514393 1944358 ~ 1986788 (+)
CI01000325_02618395_02618952 NA coding downstream 115964 2617406 ~ 2619080 (+)
CI01000325_02751187_02751618 NA coding downstream 248892 2750334 ~ 2751683 (+)
CI01000325_02767014_02793768 LNX1 coding downstream 264135 2762022 ~ 2794226 (+)
CI01000325_02834936_02881751 SCFD2 coding downstream 332974 2834416 ~ 2882034 (+)
CI01000325_02897237_02903784 NA coding downstream 394530 2895972 ~ 2903929 (+)
G463087 NA non-coding upstream 6250 2494576 ~ 2494931 (+)
G463084 NA non-coding upstream 42020 2458585 ~ 2459161 (+)
G463083 NA non-coding upstream 42876 2458106 ~ 2458305 (+)
G463080 NA non-coding upstream 47952 2452986 ~ 2453229 (+)
G463056 NA non-coding upstream 144780 2288334 ~ 2356401 (+)
G463550 NA non-coding downstream 28792 2530234 ~ 2533054 (+)
G463568 NA non-coding downstream 64066 2565508 ~ 2565770 (+)
G463582 NA non-coding downstream 79463 2580905 ~ 2581146 (+)
G463569 NA non-coding downstream 90260 2591702 ~ 2630604 (+)
G463595 NA non-coding downstream 132198 2633640 ~ 2633870 (+)
G462928 NA other upstream 500297 2000477 ~ 2000884 (+)
G462778 NA other upstream 604366 1828082 ~ 1896815 (+)
G462730 NA other upstream 880987 1617596 ~ 1620194 (+)
G463566 NA other downstream 61713 2563155 ~ 2563735 (+)
G463724 NA other downstream 226764 2728206 ~ 2728450 (+)
G464950 NA other downstream 2557014 5058456 ~ 5090938 (+)
CI01000325_05549713_05553140 TMEM251 other downstream 3050678 5549713 ~ 5554577 (+)
CI01000325_05655953_05691697 PRIMA1 other downstream 3153970 5654840 ~ 5692630 (+)

Expression


Co-expression Network