G463709


Basic Information

Item Value
gene id G463709
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 2675796 ~ 2676280 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU532305
AATTTTTTTGTAACCTTGGCCAGATCTGTGCCTTGCCACAATTCTGTCTCTGAGCTCTTCAGGCAGTTCCTTTGACCTCATGATTCTCATTTGCTCTAACATGCACTGTGAGCTGTAAGGTCTTATATAGACAGGTGTGTGGCTTTCCTAATCAAGTCCAATCAGTATAATCAAACACAGCTGGACTCAAATGAAGGTGTAGAACCATTTCAAGGATGATCAGAAGAAATGGACAGCACCTGAGTTAAATATATGAGTGTCACAGCAAAGGGTCTGAATACTTAGGACCATGTGATATTTCAGTTTTTCTTTTTTAATAAATCTGCAAAAATGTCAACAATTCTGTGTTTTTCTGTCAATATGGGGTGCTGTGTGTACATTAATGAGGAAAAAAAAATGAACTTAAATGATTTTAGCAAATGGCTGCAATATAACAAAGAGTGAAAAATTTAAGGGGGTCTGAATACTTTCCGTACCCACTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532305 True 485 lncRNA 0.37 1 2675796 2676280

Neighbor

gene id symbol gene type direction distance location
CI01000325_02618395_02618952 NA coding upstream 56716 2617406 ~ 2619080 (+)
CI01000325_02484476_02491983 KDR coding upstream 183570 2484476 ~ 2492226 (+)
CI01000325_02399892_02431492 NA coding upstream 244304 2399892 ~ 2431492 (+)
CI01000325_02211008_02215705 L3HYPDH coding upstream 459982 2209618 ~ 2215814 (+)
CI01000325_02067666_02085794 ESR2A, ESR2, ERBETA coding upstream 590002 2067666 ~ 2085794 (+)
CI01000325_02751187_02751618 NA coding downstream 74054 2750334 ~ 2751683 (+)
CI01000325_02767014_02793768 LNX1 coding downstream 89297 2762022 ~ 2794226 (+)
CI01000325_02834936_02881751 SCFD2 coding downstream 158136 2834416 ~ 2882034 (+)
CI01000325_02897237_02903784 NA coding downstream 219692 2895972 ~ 2903929 (+)
CI01000325_02968026_02987575 NA coding downstream 291746 2968026 ~ 2988001 (+)
G463595 NA non-coding upstream 41926 2633640 ~ 2633870 (+)
G463569 NA non-coding upstream 45192 2591702 ~ 2630604 (+)
G463582 NA non-coding upstream 94650 2580905 ~ 2581146 (+)
G463568 NA non-coding upstream 110026 2565508 ~ 2565770 (+)
G463550 NA non-coding upstream 142742 2530234 ~ 2533054 (+)
G463716 NA non-coding downstream 32997 2709277 ~ 2709656 (+)
G463725 NA non-coding downstream 52499 2728779 ~ 2728979 (+)
G463727 NA non-coding downstream 55219 2731499 ~ 2731721 (+)
G463731 NA non-coding downstream 66368 2742648 ~ 2742902 (+)
G463566 NA other upstream 112061 2563155 ~ 2563735 (+)
G462928 NA other upstream 674912 2000477 ~ 2000884 (+)
G462778 NA other upstream 778981 1828082 ~ 1896815 (+)
G462730 NA other upstream 1055602 1617596 ~ 1620194 (+)
G463724 NA other downstream 51926 2728206 ~ 2728450 (+)
G464950 NA other downstream 2382176 5058456 ~ 5090938 (+)
CI01000325_05549713_05553140 TMEM251 other downstream 2875840 5549713 ~ 5554577 (+)
CI01000325_05655953_05691697 PRIMA1 other downstream 2979132 5654840 ~ 5692630 (+)
G466144 NA other downstream 3822486 6498766 ~ 6501978 (+)

Expression


Co-expression Network