G463771


Basic Information

Item Value
gene id G463771
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 3032410 ~ 3033231 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU532369
AGTTGTACGCAAATCGGGCTGGAACAGAGCCAGTTTCGGCCATTTTATGGGATTTGCCATAGAAACATTTACATAGAAACATTACATTTTCTATTGTCTGCTGGTTTCATTCTATCAGCCTTCAGAACAGAAATCGCTTGGAGCGTACAGTTAAAGTTTGTTCGAAAATTATTGGACCTCCTATCAGGACTCTTTCCACTATAAGTGAACAGCAAATGCTGAAGTTGGCTGGTAGGATTTTACATGACCCATCACATGTTTTGTTTTCTGAATTTGTGTGGCTCCCTTCAGAGCGACGACTTCGTTGTCCAGGTTGTAGGACACAAAGGAGGAAGGCAACCTTCATTCCTAAAGTGGCTCAGCTTCTAAATTCTCAATTTCTGGCCACCAGGCTTGCCATGTTGTGATTACATATTTTTTTAAAAACTTTTTTTGTTATATTTTTATAGGGTCTGGATCTGCTTCTTAGATGTTTATGTCATATCATAGAATACATGTTGCATACATTGTGTTATTTACTGTGTTGTGTTTTTGACGTATATTGCTTGTTACTCTGCGTGACCTTGTGAATTGCCCTTCGGGGATAAATAAATTGAAATTGTCATGGAAACATTTAATTTTTTACACCTTAACAGTTTTAGCCCCACCTTGGGCCTGTTGTCCATTAAATCAATAAAACAAACCAAACAGTGATATTTCTGCATATTGTTTAGGCTATGTAATTCATGGTAATATTAATGGGTTTTAATTTAGATACCTTGCAGAATCACATCTGGATTGTGAAGTAAAGCCAGATGAGAACCACTATGAGTAATATTTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU532369 True 822 lncRNA 0.37 1 3032410 3033231

Neighbor

gene id symbol gene type direction distance location
CI01000325_02968026_02987575 NA coding upstream 44409 2968026 ~ 2988001 (+)
CI01000325_02897237_02903784 NA coding upstream 128481 2895972 ~ 2903929 (+)
CI01000325_02834936_02881751 SCFD2 coding upstream 150376 2834416 ~ 2882034 (+)
CI01000325_02767014_02793768 LNX1 coding upstream 238184 2762022 ~ 2794226 (+)
CI01000325_02751187_02751618 NA coding upstream 280727 2750334 ~ 2751683 (+)
CI01000325_03041882_03051690 USP46 coding downstream 8651 3041882 ~ 3051927 (+)
CI01000325_03097491_03100127 SGCB coding downstream 64260 3097491 ~ 3100321 (+)
CI01000325_03102298_03105905 NA coding downstream 69067 3102298 ~ 3105905 (+)
CI01000325_03106141_03113715 NA coding downstream 72910 3106141 ~ 3114110 (+)
CI01000325_03137938_03140636 NA coding downstream 104707 3137938 ~ 3140641 (+)
G463731 NA non-coding upstream 289508 2742648 ~ 2742902 (+)
G463727 NA non-coding upstream 300689 2731499 ~ 2731721 (+)
G463725 NA non-coding upstream 303431 2728779 ~ 2728979 (+)
G463716 NA non-coding upstream 322754 2709277 ~ 2709656 (+)
G463773 NA non-coding downstream 26554 3059785 ~ 3060011 (+)
G463776 NA non-coding downstream 53431 3086662 ~ 3086962 (+)
G463777 NA non-coding downstream 59395 3092626 ~ 3092833 (+)
G463778 NA non-coding downstream 61722 3094953 ~ 3095183 (+)
G463782 NA non-coding downstream 97967 3131198 ~ 3131371 (+)
G463724 NA other upstream 303960 2728206 ~ 2728450 (+)
G463566 NA other upstream 468675 2563155 ~ 2563735 (+)
G462928 NA other upstream 1031526 2000477 ~ 2000884 (+)
G462778 NA other upstream 1135595 1828082 ~ 1896815 (+)
G462730 NA other upstream 1412216 1617596 ~ 1620194 (+)
G464950 NA other downstream 2025225 5058456 ~ 5090938 (+)
CI01000325_05549713_05553140 TMEM251 other downstream 2518889 5549713 ~ 5554577 (+)
CI01000325_05655953_05691697 PRIMA1 other downstream 2622181 5654840 ~ 5692630 (+)
G466144 NA other downstream 3465535 6498766 ~ 6501978 (+)
G466137 NA other downstream 3583969 6617200 ~ 6619471 (+)

Expression


Co-expression Network