G465042


Basic Information

Item Value
gene id G465042
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 4890380 ~ 4890594 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU533781
TAAAAGTAATGCATTACAATATTGCGTTACTTCCTAAAAAAGTAACTAATTGCGTTACTTAGTTACTTTTTATGAAAAGTAATGCGTTACATTACTTTTGCATTACTTTTTCTCACGTGGGCTGGGCTTGCTTGTTTATTTTTTAATAACAACAAAAAAAGTTCTATTTTTGGCAAATGACAAGGCTCTTTAAGGCTAAAAGTGAAATGAATAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU533781 True 215 lncRNA 0.29 1 4890380 4890594

Neighbor

gene id symbol gene type direction distance location
CI01000325_04843115_04855068 NRBP1, NRBP1.L coding upstream 34197 4840956 ~ 4856183 (+)
CI01000325_04819341_04824750 NA coding upstream 65506 4819262 ~ 4824874 (+)
CI01000325_04802383_04811619 TTBK2B coding upstream 77336 4802383 ~ 4813044 (+)
CI01000325_04794256_04798610 SLC35F6 coding upstream 91611 4794256 ~ 4798769 (+)
CI01000325_04772555_04778579 NA coding upstream 111633 4771760 ~ 4778747 (+)
CI01000325_04924091_05041746 SYNE1A coding downstream 33497 4924091 ~ 5041865 (+)
CI01000325_05073342_05079748 ZBTB2B coding downstream 182748 5073342 ~ 5080187 (+)
CI01000325_05102102_05106486 NA coding downstream 211197 5101791 ~ 5107334 (+)
CI01000325_05174967_05175854 STX11B.1 coding downstream 283864 5174458 ~ 5176044 (+)
CI01000325_05183316_05189310 IRF4B coding downstream 292021 5182615 ~ 5189364 (+)
G464953 NA non-coding upstream 119074 4763545 ~ 4771306 (+)
G465028 NA non-coding upstream 148682 4741499 ~ 4741698 (+)
G465009 NA non-coding upstream 275645 4614532 ~ 4614735 (+)
G464958 NA non-coding upstream 287625 4601664 ~ 4602755 (+)
G464980 NA non-coding upstream 301188 4578171 ~ 4589192 (+)
CI01000325_05257907_05258833 FOXQ1B non-coding downstream 320313 5256693 ~ 5259276 (+)
G465175 NA non-coding downstream 554966 5445560 ~ 5452746 (+)
G465251 NA non-coding downstream 675757 5566351 ~ 5566593 (+)
CI01000325_05626291_05627850 NA non-coding downstream 735618 5626212 ~ 5628157 (+)
G465723 NA non-coding downstream 748624 5639218 ~ 5639651 (+)
G463724 NA other upstream 2161930 2728206 ~ 2728450 (+)
G463566 NA other upstream 2326645 2563155 ~ 2563735 (+)
G462928 NA other upstream 2889496 2000477 ~ 2000884 (+)
G462778 NA other upstream 2993565 1828082 ~ 1896815 (+)
G462730 NA other upstream 3270186 1617596 ~ 1620194 (+)
G464950 NA other downstream 167862 5058456 ~ 5090938 (+)
CI01000325_05549713_05553140 TMEM251 other downstream 661526 5549713 ~ 5554577 (+)
CI01000325_05655953_05691697 PRIMA1 other downstream 764818 5654840 ~ 5692630 (+)
G466144 NA other downstream 1608172 6498766 ~ 6501978 (+)
G466137 NA other downstream 1726606 6617200 ~ 6619471 (+)

Expression


Co-expression Network