G465922


Basic Information

Item Value
gene id G465922
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 5892231 ~ 5892582 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU534808
TAGGGGAAAAGTACTTGGATGACATACTACTTCCGCAAAAATTCTGAATTGTGCATTCAAAGGACACTTTTTATTATTCCATGATGCCAAAGGAGAGGATTTATAAATGGCAGTGAAGCCAGAGATTGTATATTATAGAGAGATGAGAGGGTCTGTATCTCTTACCATTGGAGAAAGCGTAACGGCTAACTTAATCACGTGCGGCACTTCTCAGCCTATCGTGTAATGGCAGTGACATCAGTCGCAATATTCCCTAGTCTGCCTTCTCTTAAAAAAATATATTTTTATCAAGCTAAAATCTACATATAGTTCCCAACGAAAGTATTGTTTAGTGTAAAACATGCTGAAGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU534808 True 352 lncRNA 0.37 1 5892231 5892582

Neighbor

gene id symbol gene type direction distance location
CI01000325_05852745_05882303 KIF26AA coding upstream 9550 5852522 ~ 5882681 (+)
CI01000325_05806682_05840917 NA coding upstream 51314 5806682 ~ 5840917 (+)
CI01000325_05793873_05794963 TMEM179 coding upstream 97118 5793873 ~ 5795113 (+)
CI01000325_05765629_05781041 PPP4R4 coding upstream 110775 5765629 ~ 5781456 (+)
CI01000325_05740859_05742551 NA coding upstream 148283 5740592 ~ 5743948 (+)
CI01000325_05941338_05958627 NA coding downstream 48756 5941338 ~ 5959001 (+)
CI01000325_05963237_05964658 NA coding downstream 70441 5963023 ~ 5966130 (+)
CI01000325_05975085_05977148 ZBTB1 coding downstream 82365 5974947 ~ 5977472 (+)
CI01000325_06007394_06009436 VRTN coding downstream 114694 6007276 ~ 6010414 (+)
CI01000325_06045898_06049007 NA coding downstream 153316 6045898 ~ 6049364 (+)
G465732 NA non-coding upstream 177826 5663051 ~ 5714405 (+)
G465726 NA non-coding upstream 237897 5654059 ~ 5654334 (+)
G465723 NA non-coding upstream 252580 5639218 ~ 5639651 (+)
CI01000325_05626291_05627850 NA non-coding upstream 264074 5626212 ~ 5628157 (+)
G465251 NA non-coding upstream 325638 5566351 ~ 5566593 (+)
G465958 NA non-coding downstream 17821 5910403 ~ 5910690 (+)
G465979 NA non-coding downstream 251425 6144007 ~ 6144156 (+)
G466010 NA non-coding downstream 295998 6188580 ~ 6188819 (+)
G466011 NA non-coding downstream 296641 6189223 ~ 6189915 (+)
G466014 NA non-coding downstream 299527 6192109 ~ 6192391 (+)
CI01000325_05655953_05691697 PRIMA1 other upstream 198248 5654840 ~ 5692630 (+)
CI01000325_05549713_05553140 TMEM251 other upstream 337654 5549713 ~ 5554577 (+)
G464950 NA other upstream 801293 5058456 ~ 5090938 (+)
G463724 NA other upstream 3163781 2728206 ~ 2728450 (+)
G463566 NA other upstream 3328496 2563155 ~ 2563735 (+)
G466144 NA other downstream 606184 6498766 ~ 6501978 (+)
G466137 NA other downstream 724618 6617200 ~ 6619471 (+)
G466236 NA other downstream 1111035 7003617 ~ 7004655 (+)
G466227 NA other downstream 1419501 7312083 ~ 7314812 (+)
G466219 NA other downstream 1589454 7482036 ~ 7486407 (+)

Expression


Co-expression Network