Gene
RNA
| Item | Value |
|---|---|
| gene id | G466011 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000325 |
| NCBI id | null |
| chromosome length | 10587162 |
| location | 6189223 ~ 6189915 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU534933 | True | 693 | lncRNA | 0.37 | 1 | 6189223 | 6189915 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000325_06045898_06049007 | NA | coding | upstream | 139859 | 6045898 ~ 6049364 (+) |
| CI01000325_06007394_06009436 | VRTN | coding | upstream | 178809 | 6007276 ~ 6010414 (+) |
| CI01000325_05975085_05977148 | ZBTB1 | coding | upstream | 211751 | 5974947 ~ 5977472 (+) |
| CI01000325_05963237_05964658 | NA | coding | upstream | 223093 | 5963023 ~ 5966130 (+) |
| CI01000325_05941338_05958627 | NA | coding | upstream | 230222 | 5941338 ~ 5959001 (+) |
| CI01000325_06262523_06270980 | DLL4 | coding | downstream | 72193 | 6262108 ~ 6272168 (+) |
| CI01000325_06275779_06276922 | CHAC1 | coding | downstream | 84663 | 6272612 ~ 6277368 (+) |
| CI01000325_06325122_06326464 | RHOV | coding | downstream | 135207 | 6325122 ~ 6327542 (+) |
| CI01000325_06347413_06355066 | ZFYVE1 | coding | downstream | 157498 | 6347413 ~ 6355322 (+) |
| CI01000325_06372477_06396130 | DPF3 | coding | downstream | 182562 | 6372477 ~ 6396130 (+) |
| G466010 | NA | non-coding | upstream | 404 | 6188580 ~ 6188819 (+) |
| G465979 | NA | non-coding | upstream | 45067 | 6144007 ~ 6144156 (+) |
| G465958 | NA | non-coding | upstream | 278533 | 5910403 ~ 5910690 (+) |
| G465922 | NA | non-coding | upstream | 296641 | 5892231 ~ 5892582 (+) |
| G465732 | NA | non-coding | upstream | 474818 | 5663051 ~ 5714405 (+) |
| G466014 | NA | non-coding | downstream | 2194 | 6192109 ~ 6192391 (+) |
| G466015 | NA | non-coding | downstream | 3503 | 6193418 ~ 6193776 (+) |
| G466018 | NA | non-coding | downstream | 6408 | 6196323 ~ 6196541 (+) |
| G466030 | NA | non-coding | downstream | 16796 | 6206711 ~ 6206934 (+) |
| G466036 | NA | non-coding | downstream | 23561 | 6213476 ~ 6213684 (+) |
| CI01000325_05655953_05691697 | PRIMA1 | other | upstream | 495240 | 5654840 ~ 5692630 (+) |
| CI01000325_05549713_05553140 | TMEM251 | other | upstream | 634646 | 5549713 ~ 5554577 (+) |
| G464950 | NA | other | upstream | 1098285 | 5058456 ~ 5090938 (+) |
| G463724 | NA | other | upstream | 3460773 | 2728206 ~ 2728450 (+) |
| G463566 | NA | other | upstream | 3625488 | 2563155 ~ 2563735 (+) |
| G466144 | NA | other | downstream | 308851 | 6498766 ~ 6501978 (+) |
| G466137 | NA | other | downstream | 427285 | 6617200 ~ 6619471 (+) |
| G466236 | NA | other | downstream | 813702 | 7003617 ~ 7004655 (+) |
| G466227 | NA | other | downstream | 1122168 | 7312083 ~ 7314812 (+) |
| G466219 | NA | other | downstream | 1292121 | 7482036 ~ 7486407 (+) |
