G466103


Basic Information

Item Value
gene id G466103
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 6488077 ~ 6488873 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU535040
AGAAATGGGCTCACTGCGCTGTGGTCTTCTCTCACCCTCGAAAGCATTGGCAACATCCACAAGGAAGGTCTGCGCAGTGGGGCGCCACGGGTGGTCGGCGATCGTGGAAGGGTAGAGCAGCTGAAGAGCACGTCACTGGCCAGAGCCTGCTCCAGAACTGAATCTCCCAGAGAAGGCAGCCGCTGACCCCGGTATATACTCTCATCTGACAGGGTGCGGTGTAGAGAACGCCGCCCTGAGCTTGCTAGACCTGAGGAGGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU535040 True 262 lncRNA 0.60 2 6488077 6488873

Neighbor

gene id symbol gene type direction distance location
CI01000325_06372477_06396130 DPF3 coding upstream 91947 6372477 ~ 6396130 (+)
CI01000325_06347413_06355066 ZFYVE1 coding upstream 132755 6347413 ~ 6355322 (+)
CI01000325_06325122_06326464 RHOV coding upstream 160535 6325122 ~ 6327542 (+)
CI01000325_06275779_06276922 CHAC1 coding upstream 210709 6272612 ~ 6277368 (+)
CI01000325_06262523_06270980 DLL4 coding upstream 216561 6262108 ~ 6272168 (+)
CI01000325_06583304_06591407 FNTB coding downstream 94431 6583304 ~ 6591733 (+)
CI01000325_06603583_06613761 NA coding downstream 114710 6603583 ~ 6613941 (+)
CI01000325_06655754_06657537 NA coding downstream 165837 6654710 ~ 6657621 (+)
CI01000325_06662207_06663957 NA coding downstream 173209 6662082 ~ 6664613 (+)
CI01000325_06668049_06675473 GPR176 coding downstream 179176 6668049 ~ 6675783 (+)
G466114 NA non-coding upstream 2967 6482133 ~ 6485110 (+)
G466126 NA non-coding upstream 9215 6478628 ~ 6478862 (+)
G466119 NA non-coding upstream 21261 6466197 ~ 6466816 (+)
G466116 NA non-coding upstream 30006 6455843 ~ 6458071 (+)
G466113 NA non-coding upstream 34824 6451849 ~ 6453253 (+)
G466133 NA non-coding downstream 112203 6601076 ~ 6716044 (+)
G466134 NA non-coding downstream 235515 6724388 ~ 6725749 (+)
G466293 NA non-coding downstream 482770 6971643 ~ 6974086 (+)
G466226 NA non-coding downstream 497698 6986571 ~ 6990460 (+)
G466237 NA non-coding downstream 504983 6993856 ~ 6997553 (+)
CI01000325_05655953_05691697 PRIMA1 other upstream 794094 5654840 ~ 5692630 (+)
CI01000325_05549713_05553140 TMEM251 other upstream 933500 5549713 ~ 5554577 (+)
G464950 NA other upstream 1397139 5058456 ~ 5090938 (+)
G463724 NA other upstream 3759627 2728206 ~ 2728450 (+)
G463566 NA other upstream 3924342 2563155 ~ 2563735 (+)
G466144 NA other downstream 9893 6498766 ~ 6501978 (+)
G466137 NA other downstream 128327 6617200 ~ 6619471 (+)
G466236 NA other downstream 514744 7003617 ~ 7004655 (+)
G466227 NA other downstream 823210 7312083 ~ 7314812 (+)
G466219 NA other downstream 993163 7482036 ~ 7486407 (+)

Expression


Co-expression Network