XLOC_013288



Basic Information


Item Value
gene id XLOC_013288
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 13077843 ~ 13114318 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00027274
CCCCTTCAAGACCTCCTCACATGATAAATGACCACATTCATTCGTCACAACATACTTGTAGACGTCGAGACTGTCATCCTCCACTACGTTTTCTGCTGATACATGAAACGTAATGCAAGAGTCAGTACAGACAATGATATCACAACCTCAAGGACTGATACCAGCCTGATAAACCCCAGGAGAGATGGATAAACATTCACACTGGCCTGCCTTTTTTTCGCTGACGATTTTTTTCTTCCATGCATTGGTTGCTGGGATGAAGGCATCACACAACCCTGCTGGGAATACCGTGGAATCTGTTCACCTTCCAAAACCAGCACTGCATCTTGAAAACAGTCGTCCTGTCTGAAAGACTGAAGGACCCTGAGAAGCTTCTGGGAGTGCTGAGGGTCCGAAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00027274 True 397 lncRNA 0.46 2 13077843 13114318

Neighbor


gene id symbol gene type direction distance location
XLOC_013285 srgap1a coding downstream 21042 12867400 ~ 13056801 (-)
XLOC_013286 CT573465.1 coding downstream 132112 12945617 ~ 12945731 (-)
XLOC_013284 NA coding downstream 214320 12862604 ~ 12863523 (-)
XLOC_013283 parp12a coding downstream 219827 12839126 ~ 12858016 (-)
XLOC_013282 BX247877.1 coding downstream 312391 12760802 ~ 12765452 (-)
XLOC_013289 C7H19orf12 coding upstream 9405 13123723 ~ 13133268 (-)
XLOC_013290 klhl36 coding upstream 81427 13195745 ~ 13203401 (-)
XLOC_013291 BX511124.1 coding upstream 167336 13281654 ~ 13287651 (-)
XLOC_013292 cmip coding upstream 209822 13324140 ~ 13362926 (-)
XLOC_013293 BX890576.1 coding upstream 362784 13477102 ~ 13478222 (-)
XLOC_013384 BX323829.1 misc upstream 6427784 19542102 ~ 19542231 (-)
XLOC_013281 AL929229.2 non-coding downstream 545683 12532046 ~ 12532160 (-)
XLOC_013278 NA non-coding downstream 714514 12358383 ~ 12363329 (-)
XLOC_013294 BX950204.1 non-coding upstream 429932 13544250 ~ 13544367 (-)
XLOC_013300 NA non-coding upstream 1649585 14763903 ~ 14765883 (-)
XLOC_013308 BX649610.1 non-coding upstream 1921833 15036151 ~ 15036269 (-)

Expression



Co-expression Network