XLOC_013290 (klhl36)


Basic Information

Item Value
gene id XLOC_013290
gene name klhl36
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 13195745 ~ 13203401 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026291
AATAAGACTTTAATATGGCCAAATAATAGaaatatggttaaaaaaaaatctgaaatttacTATACACTTGTTGTCAAAGCTGTAGCGATAAATGATGTCCATTTATATTGAAAATCCGCGAAACAGTTACGAATTATTGTGCAAGAGGCTTTTCCTTTGATAGTTATGTCAGATGACACAATGGAGATTGGAAAGCAAACTCGTCTGTCACGTCCACACAGATTAAGTGAATCTTCAAAGGTGTATCGATGGGCAGACCAAGCTAACAACCTCCTGCAAGGCTTAAATGAGCAACGACAGCATGGTCAAATGTGTGATGTGGTACTGGTAGCTGATGACCAGCGGATTCCTGCACATCGGGCTCTACTCGCTGTATCCAGTCCTTACTTCCAGGCCATGTTCACCCTGGGCATGCGGGAGGAACACGAGTCTGAAATAGAGCTAGTAGGAGCCTCCTATGTTGGCGTTAAAGCCGTAATAGACTTCCTATACAGCGGCAATTTACCTCTCGACGGAGGAAACATCGATTACGTCCTGGAAACAGCTCACCTTCTGCAAGTGTGGCAAGCTGTGGATTTCTGTTGTCAGTATTTAGAAAAAGAGGTACGTGAAGACAACTACCTGTACCTTCAAGAACTCGCCTTGCTATACAGTCTAGATCGGCTGGATGCCTTCATAGACAGAtttattttgaaacatttcaGCACACTTTCCATCACTTCCGAGTTCCTCCAGGATGTGCGGATGTTCAAGCTTTGTGCTTACCTTTCCAGCGAACAAGTGCAATGCCTAAACGAGGAAACTCTTTTTGAGGTTGCCTTTAAGTGGTTGAAACAAAAACCTGAACGTCTTGAATTCGCCCTTCAGCTCCTTTCCAACATTCGTTTCGCTCTCATCCcgttttatttactaaaatattatgttttgccTAACGTACATTCCCTGCTGCCTCTGGACACAAGCTGCAAGGTGTTAGTTGAGGAAGCAATAGACTACCACAGGAAGCTCAGCGCTCAGCCTGTAATGCAGACACAGCGAACAGGCCTTCGTGGAGGTGTGGAGTGTCTGCTGCTGCTGGGAGGAGAAGTGTCCGAGCGTGGAGAAGGTTTGAGTGCTGAGGTTTGCTGGCTGGATGAAGAAGCAGGGAAGTGGGTTGAGGAGACTAAGATGCCAGCGCCAAGGAGTCAGCATTGTGTGGCGGTTTTGGGTGGATTCATTTTCACAGCCGGTGGGAGCTGCTCACCGGACAACGGGGGAGATTCTGCAAGTGACATGCTGTATCGGTACGATCCCCGGAGATGCCATTGGATCAAGGGTGCTCCTATGAACCAACGGCGTGTGGATTTCTATCTAGGAACCATGGGAGAGTGTCTTATTGCTGTCGGGGGACGCAATGATAGCGGACCTTTGTCTTCTGTCGAAGTGTATCATCCTGCTGATGACCACTGGACCTACGTTGCAGAATTACCCaaATTCACATATGGTCATGCAGGCACCATCCACAAGGGCATCGTCTACATTTCAGGGGGTCATGATTACCAGATCGGTCCATACAGACATGACATGCTAAGTTATGACCCTAAAACTGCAGATGCATGGAATGAGTGCCAGGCCATGATCTTGGCACGAGGCTGGCACTCAATGGCATCTCTAGAGGACAGAATTTATGCCATTGGGGGTAGTGATGACCATGAGGACAGCATGGAGCGTTTTGATGTGTTAGAGGTGGAAGCGTTTGACCCGCAGACCAATCAGTGGACTATGATTGCTCCTCTCAGGTATGCTAGCAGTGAGGCTGGTTTAGCAGTGCTGAATAGAAAGATCTATGTTTTGGGAGGTTATAGCTGGGAGGCCATGGACTTTTCACAGGGCACTCAAGTGTTTGATCCAGACAAGGAACAGTGGACTTTGGGTCCAAATCTGCCAAAGCATATTGCTGGACCTTCGTGTGTGTGTCTTATAAAACCTGAGCTAATCGATAGTATAGACACTGAGTGAGACAAACATAGCTCCAATCAGGAGCAACATAAGTGATTGACTGGGTGTCTTCTTCTAAAGAACTAAACTATTAAAACTTGGGTTGTCAAG
>TCONS_00026292
AATAAGACTTTAATATGGCCAAATAATAGaaatatggttaaaaaaaaatctgaaatttacTATACACTTGTTGTCAAAGCTGTAGCGATAAATGATGTCCATTTATATTGAAAATCCGCGAAACAGTTACGAATTATTGTGCAAGAGGCTTTTCCTTTGATAGTTATGTCAGATGACACAATGGAGATTGGAAAGCAAACTCGTCTGTCACGTCCACACAGATTAAGTGAATCTTCAAAGGTGTATCGATGGGCAGACCAAGCTAACAACCTCCTGCAAGGCTTAAATGAGCAACGACAGCATGGTCAAATGTGTGATGTGGTACTGGTAGCTGATGACCAGCGGATTCCTGCACATCGGGCTCTACTCGCTGTATCCAGTCCTTACTTCCAG
>TCONS_00026293
GGAAGCTTTACCGTGCTACTCTCAAACGAATTCTCCACTCAGGGGCATTTAATAAGACTTTAATATGGCCAAATAATAGaaatatgATAGTTATGTCAGATGACACAATGGAGATTGGAAAGCAAACTCGTCTGTCACGTCCACACAGATTAAGTGAATCTTCAAAGGTGTATCGATGGGCAGACCAAGCTAACAACCTCCTGCAAGGCTTAAATGAGCAACGACAGCATGGTCAAATGTGTGATGTGGTACTGGTAGCTGATGACCAGCGGATTCCTGCACATCGGGCTCTACTCGCTGTATCCAGTCCTTACTTCCAG

Function

symbol description
klhl36 Predicted to be involved in protein ubiquitination. Orthologous to human KLHL36 (kelch like family member 36).

GO:

id name namespace
GO:0016567 protein ubiquitination biological_process

KEGG:

id description
ko04121 Ubiquitin system

ZFIN:

id description
ZDB-GENE-050522-324 Predicted to be involved in protein ubiquitination. Orthologous to human KLHL36 (kelch like family member 36).

Ensembl:

ensembl_id ENSDARG00000030251

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026291 False 2088 mRNA 0.46 6 13195745 13203351
TCONS_00026292 False 393 mRNA 0.40 3 13201669 13203351
TCONS_00026293 True 320 mRNA 0.44 3 13201669 13203401

Neighbor

gene id symbol gene type direction distance location
XLOC_013289 C7H19orf12 coding downstream 62477 13123723 ~ 13133268 (-)
XLOC_013287 rxylt1 coding downstream 73762 13063210 ~ 13121983 (-)
XLOC_013288 NA coding downstream 81427 13077843 ~ 13114318 (-)
XLOC_013285 srgap1a coding downstream 138944 12867400 ~ 13056801 (-)
XLOC_013286 CT573465.1 coding downstream 250014 12945617 ~ 12945731 (-)
XLOC_013291 BX511124.1 coding upstream 78253 13281654 ~ 13287651 (-)
XLOC_013292 cmip coding upstream 120739 13324140 ~ 13362926 (-)
XLOC_013293 BX890576.1 coding upstream 273701 13477102 ~ 13478222 (-)
XLOC_013294 BX950204.1 coding upstream 340849 13544250 ~ 13544367 (-)
XLOC_013295 mlycd coding upstream 1030152 14233553 ~ 14274803 (-)
XLOC_013384 BX323829.1 misc upstream 6338701 19542102 ~ 19542231 (-)
XLOC_013284 NA non-coding downstream 332222 12862604 ~ 12863523 (-)
XLOC_013282 BX247877.1 non-coding downstream 430293 12760802 ~ 12765452 (-)
XLOC_013281 AL929229.2 non-coding downstream 663585 12532046 ~ 12532160 (-)
XLOC_013300 NA non-coding upstream 1560502 14763903 ~ 14765883 (-)
XLOC_013308 BX649610.1 non-coding upstream 1832750 15036151 ~ 15036269 (-)

Expression


Co-expression Network