XLOC_013307 (btbd11b)


Basic Information

Item Value
gene id XLOC_013307
gene name btbd11b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 14956165 ~ 15104858 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026320
ATGGCAAAAAGGGGTAAATCCGTGGTGAGGACCCTGGAGGATTTGACGCTGGATTCGGGTTACGGTGGAGCCGCGGACTCCTTCAGGTCATCCAGCTTGTCTCTGTGCTGCTCCGAGGCGCACATCTCCTATGCGCATGGAGGGCACTGCTGGAATCTGACCGACTCCATGCGCAGTCGACACAACAGCCTAGACACCGTCAACACCGTCCTGGCTGAAGACGGCGAGACCCTGGAGTGTTCCGGACACTGTGCTAAACTTCCCGAGCTTGAGGATGTGCCCTGGAGCCTCGGGGAGGTGGAGAACGCGCTCAACAAGGAGGAAGAGTTGCGGTTCGGCACCGTTTCCGCGGACCTGCTCGCGCGTCTCTCCGCGCTCGTGAGCCGCGCGCTGGTCCGGATCGCCCGGGAAGCGCAGCGACTTAGTTTGCGCTACGGGAAATGCACCAAATACGAAGTCCAAAGTGCCATCAAGATGATTCTATCGTGGACCATCTCGGTCAACTGCATCGCCGCTTCACTCAGCGCGCTGTCCATGTACAACATGAGCACCGAGGATAAATTCAGCCGGGGGAAATCGGAGAGATGCGGCTTGGTCTTCTCTGTGGGGAAGTTCTTCAGGTGGATGGTGGACAGCAGGGTCGCGGTGCGCGTCCACGAGCACGCGGCTATATACCTGACCGGCTGCATGGAGAGCCTCTTCCGCGAGGTCTTCACTCGGGTGTTGAATAGCTCGGTGGTGGAGAAGGATAACGGGATCCCCAAATTTACACTGGAATCCTTTGAGCAGGCTCTGAGCAATGATTCAGAGTTGTACGGCCTCCTTTTGCCCTATCAGCATCTCACGTGTGGGAAAAATGCCAATGGAATCCTCAATTTGCCAGACAGTTTGAGCCTGCACAGGAACCAGCAGTGCTCAAGTAAAGCTGGAGACGCCTACAGTCAGTCCGAGCAGCGCACTATTGAGCAATCCCTACTGGCCACACGTGTGGGGAGCATCGCAGAGCTCAGTGATTTAGTGTCCAGAGCCATGCATTACCTCCAGCCTCTGAGCATCAAGAACCACAGTAACGGGACGCCGTTGCCCCAGAAGAGCAGCTTGGTCCACTGGGAGCCCGAGGCCTTGTACACGCTCTGCTACTTCATGCACTGCCCTCAGATGGAGTGGGAGAACCCCAACGTGGAGCCCTCCAAAGTCACCCTGCAGAACGAGAGGCCGTTTCTGGTGCTGCCTCCTCTGATGGAGTGGATCAGAGTGGCTTTGGCACACGCGGAGCACCGCCGCAGCTTTTCAGTGGATAGCGATGATGTTCGGCAGGCGGCCAGACTCCTGCTGCCCGGGGTGGACTGTGAACCCCGCCAGCTCAAgACGGACGACTGTTTCTGCGTGTCACGTAAGCTTGATGCTGCTTCCACCGAGGCCAAGTTCCTGCAGGATCTGGGTTTCCGAATGCTCAACTGCGGCCGGACTGACCTGGTCAACCAAGCCATTAACTTACTGGGACCTGGAGGAATTAACAGCATGAGTGAACAGGGCATGACCCCTCTAATGTACGCATGTGTTCGCGGTGATGAAGCCATGGTTCAGATGCTGCTAGACGCAGGAGCTGACATCAACAGTGAGGTGCCAAACACAGTGCAAAAGTTCCCCTCAGTCTTCCCAGAGACCAGGCAGGCCACACCGCTCACCTTTGCCGTACTTCACCAGCACATCCCTGTGGTGCAGCTGCTTCTGGACGCTGGCGCTAACGTGGAGGGCTCTCTGCAGGACGGCATGGAGAACTACACTGAGACGCCTTTGCAGTTGGCTTCGGCCGCAGGGAACTTTGAGCTGGTCAGTCTGCTTTTGGAGAGAGGAGCAGACCCCATGATCGGGACCATGTACCGCAACGGCATCTCTACCGCACCACACGGAGACATGAACTCTTACAGCCTGGCCGCTGCGCATGGAcacaggaacgTGTTCTGCAAGCTTCTGTCGCAGTCGGAAAAGGGGAAGGCGGACGTTTTGTCTCTGCAGGAGATTCTGGCGGAGGGATCTGACCTGGAGGAGAGGAATTCCCTAAAGATGGAGGCGACCCGCACGGGGAAAGCCAAACTCAAAGCGCTGAGGGAGGCCATGTATCACAGCTCCGAACATGGATACGTCGACATCACCCTGGACATCAGAAGTCTAGgggtgCCCTGGACGCTGCACACATGGCTGGAGTCTCTGCGAACCTGTTTCCTTCAGCACCGGCGGCCGCTGATCCAGGGTCTGCTGAAGGAGTTCAGCTCCATTGAAGAGGAGGAATATACAGAGGAGCTCATCACACACGGCCTCCCTCTCATGTTCCAGATCCTGCGCGCCAGCAAGAACGAAGTGATTAGTCAGCAGCTGGCTGTGATATTTACTCAGTGCTACGGCCCGTATCCCATTCCAAAACTGACCGAGATCAAGAGGAAACAGACCTCAAGACTGGatCCTCATTTTCTAAATAACAAGGAGATGTCAGACGTGACCTTTCTGGTGGAGGGAAAGCCATTCTACGCTCACAAAGTTTTGCTCTTCACCGCCTCCAACAGGTTTAAACTACTTCTAGCAAACAGACCAGCTGCTGAAAACACCTGTATTGAAATCAGCCACGTCAAATACAATGTGTTTCAGCTGGTGATGCAGTATCTGTACTGTGGTGGAACAGATGCTCTCCACATCAGAAACACTGAGGTTATGGATctcctctctgcatctaaGTTCTTCCAGCTGGAGGCATTACAGAGACACTGTGAGATCATCTGCGCCAAGAACATCAACACCGAAACTTGTGTGGAGATCTATAACCATGCTAAATTCCTGGAGGCACCCGAACTGTCGGCCTACATTGAAGGCTACTTCCTGAAGAACATGGCGGTTCTCATAGAGCTTGAGCCATTTAAACAGTTGCTCTATAACACCCCGGTGGAGAACTGCTGTCCTGACGTGTTGCATGACCTGGAGAAGACGCTGGCCACACGCATTCGCTCCATTCATCTGTCGTCCTCGAAGGGCTCCATTGTCTAA
>TCONS_00026321
actgtgcagggctTGGACAGAAGACAGCGTTCGAGTAGTGGTGCCTGTTTGCAGAGGAACGTTTCCCCTCGCTTTTCAGCCTTTGCAGTTATGGCAAAAAGGGGTAAATCCGTGGTGAGGACCCTGGAGGATTTGACGCTGGATTCGGGTTACGGTGGAGCCGCGGACTCCTTCAGGTCATCCAGCTTGTCTCTGTGCTGCTCCGAGGCGCACATCTCCTATGCGCATGGAGGGCACTGCTGGAATCTGACCGACTCCATGCGCAGTCGACACAACAGCCTAGACACCGTCAACACCGTCCTGGCTGAAGACGGCGAGACCCTGGAGTGTTCCGGACACTGTGCTAAACTTCCCGAGCTTGAGGATGTGCCCTGGAGCCTCGGGGAGGTGGAGAACGCGCTCAACAAGGAGGAAGAGTTGCGGTTCGGCACCGTTTCCGCGGACCTGCTCGCGCGTCTCTCCGCGCTCGTGAGCCGCGCGCTGGTCCGGATCGCCCGGGAAGCGCAGCGACTTAGTTTGCGCTACGGGAAATGCACCAAATACGAAGTCCAAAGTGCCATCAAGATGATTCTATCGTGGACCATCTCGGTCAACTGCATCGCCGCTTCACTCAGCGCGCTGTCCATGTACAACATGAGCACCGAGGATAAATTCAGCCGGGGGAAATCGGAGAGATGCGGCTTGGTCTTCTCTGTGGGGAAGTTCTTCAGGTGGATGGTGGACAGCAGGGTCGCGGTGCGCGTCCACGAGCACGCGGCTATATACCTGACCGGCTGCATGGAGAGCCTCTTCCGCGAGGTCTTCACTCGGGTGTTGAATAGCTCGGTGGTGGAGAAGGATAACGGGATCCCCAAATTTACACTGGAATCCTTTGAGCAGGCTCTGAGCAATGATTCAGAGTTGTACGGCCTCCTTTTGCCCTATCAGCATCTCACGTGTGGGAAAAATGCCAATGGAATCCTCAATTTGCCAGACAGTTTGAGCCTGCACAGGAACCAGCAGTGCTCAAGTAAAGCTGGAGACGCCTACAGTCAGTCCGAGCAGCGCACTATTGAGCAATCCCTACTGGCCACACGTGTGGGGAGCATCGCAGAGCTCAGTGATTTAGTGTCCAGAGCCATGCATTACCTCCAGCCTCTGAGCATCAAGAACCACAGTAACGGGACGCCGTTGCCCCAGAAGAGCAGCTTGGTCCACTGGGAGCCCGAGGCCTTGTACACGCTCTGCTACTTCATGCACTGCCCTCAGATGGAGTGGGAGAACCCCAACGTGGAGCCCTCCAAAGTCACCCTGCAGAACGAGAGGCCGTTTCTGGTGCTGCCTCCTCTGATGGAGTGGATCAGAGTGGCTTTGGCACACGCGGAGCACCGCCGCAGCTTTTCAGTGGATAGCGATGATGTTCGGCAGGCGGCCAGACTCCTGCTGCCCGGGGTGGACTGTGAACCCCGCCAGCTCAAgACGGACGACTGTTTCTGCGTGTCACGTAAGCTTGATGCTGCTTCCACCGAGGCCAAGTTCCTGCAGGATCTGGGTTTCCGAATGCTCAACTGCGGCCGGACTGACCTGGTCAACCAAGCCATTAACTTACTGGGACCTGGAGGAATTAACAGCATGAGTGAACAGGGCATGACCCCTCTAATGTACGCATGTGTTCGCGGTGATGAAGCCATGGTTCAGATGCTGCTAGACGCAGGAGCTGACATCAACAGTGAGGTGCCAAACACAGTGCAAAAGTTCCCCTCAGTCTTCCCAGAGACCAGGCAGGCCACACCGCTCACCTTTGCCGTACTTCACCAGCACATCCCTGTGGTGCAGCTGCTTCTGGACGCTGGCGCTAACGTGGAGGGCTCTCTGCAGGACGGCATGGAGAACTACACTGAGACGCCTTTGCAGTTGGCTTCGGCCGCAGGGAACTTTGAGCTGGTCAGTCTGCTTTTGGAGAGAGGAGCAGACCCCATGATCGGGACCATGTACCGCAACGGCATCTCTACCGCACCACACGGAGACATGAACTCTTACAGCCTGGCCGCTGCGCATGGAcacaggaacgTGTTCTGCAAGCTTCTGTCGCAGTCGGAAAAGGGGAAGGCGGACGTTTTGTCTCTGCAGGAGATTCTGGCGGAGGGATCTGACCTGGAGGAGAGGAATTCCCTAAAGATGGAGGCGACCCGCACGGGGAAAGCCAAACTCAAAGCGCTGAGGGAGGCCATGTATCACAGCTCCGAACATGGATACGTCGACATCACCCTGGACATCAGAAGTCTAGgggtgCCCTGGACGCTGCACACATGGCTGGAGTCTCTGCGAACCTGTTTCCTTCAGCACCGGCGGCCGCTGATCCAGGGTCTGCTGAAGGAGTTCAGCTCCATTGAAGAGGAGGAATATACAGAGGAGCTCATCACACACGGCCTCCCTCTCATGTTCCAGATCCTGCGCGCCAGCAAGAACGAAGTGATTAGTCAGCAGCTGGCTGTGATATTTACTCAGTGCTACGGCCCGTATCCCATTCCAAAACTGACCGAGATCAAGAGGAAACAGACCTCAAGACTGGatCCTCATTTTCTAAATAACAAGGAGATGTCAGACGTGACCTTTCTGGTGGAGGGAAAGCCATTCTACGCTCACAAAGTTTTGCTCTTCACCGCCTCCAACAGGTTTAAACTACTTCTAGCAAACAGACCAGCTGCTGAAAACACCTGTATTGAAATCAGCCACGTCAAATACAATGTGTTTCAGCTGGTGATGCAGTATCTGTACTGTGGTGGAACAGATGCTCTCCACATCAGAAACACTGAGGTTATGGATctcctctctgcatctaaGTTCTTCCAGCTGGAGGCATTACAGAGACACTGTGAGATCATCTGCGCCAAGAACATCAACACCGAAACTTGTGTGGAGATCTATAACCATGCTAAATTCCTGGAGGCACCCGAACTGTCGGCCTACATTGAAGGCTACTTCCTGAAGAACATGGCGGTTCTCATAGAGCTTGAGCCATTTAAACAGTTGCTCTATAACACCCCGGTGGAGAACTGCTGTCCTGACGTGTTGCATGACCTGGAGAAGACGCTGGCCACACGCATTCGCTCCATTCATCTGTCGTCCTCGAAGGGCTCCATTGTCTAA

Function

symbol description
btbd11b Predicted to enable protein heterodimerization activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human BTBD11 (BTB domain containing 11).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0046982 protein heterodimerization activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-99 Predicted to enable protein heterodimerization activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human BTBD11 (BTB domain containing 11).

Ensembl:

ensembl_id ENSDARG00000063040

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026320 False 3039 mRNA 0.55 17 14956165 15101193
TCONS_00026321 True 3129 mRNA 0.55 19 14956165 15104858

Neighbor

gene id symbol gene type direction distance location
XLOC_013306 mlc1 coding downstream 14325 14928040 ~ 14941840 (-)
XLOC_013305 panx2 coding downstream 33293 14906570 ~ 14922872 (-)
XLOC_013304 trabd coding downstream 54685 14885545 ~ 14901480 (-)
XLOC_013303 selenoo1 coding downstream 77030 14863407 ~ 14879135 (-)
XLOC_013302 mapk12a coding downstream 95730 14844669 ~ 14860435 (-)
XLOC_013309 mterf2 coding upstream 43073 15147931 ~ 15155962 (-)
XLOC_013310 NA coding upstream 83159 15188017 ~ 15191812 (-)
XLOC_013311 tmem263 coding upstream 154530 15259388 ~ 15269272 (-)
XLOC_013312 ric8b coding upstream 182207 15287065 ~ 15329471 (-)
XLOC_013313 rfx4 coding upstream 229259 15334117 ~ 15373620 (-)
XLOC_013384 BX323829.1 misc upstream 4437244 19542102 ~ 19542231 (-)
XLOC_013300 NA non-coding downstream 190282 14763903 ~ 14765883 (-)
XLOC_013294 BX950204.1 non-coding downstream 1411798 13544250 ~ 13544367 (-)
XLOC_013293 BX890576.1 non-coding downstream 1477943 13477102 ~ 13478222 (-)
XLOC_013291 BX511124.1 non-coding downstream 1668514 13281654 ~ 13287651 (-)
XLOC_013288 NA non-coding downstream 1841847 13077843 ~ 13114318 (-)
XLOC_013319 BX928740.1 non-coding upstream 483229 15588087 ~ 15588201 (-)
XLOC_013321 CR854977.1 non-coding upstream 770804 15875662 ~ 15875780 (-)
XLOC_013323 NA non-coding upstream 834403 15939261 ~ 15970573 (-)
XLOC_013324 NA non-coding upstream 886596 15991454 ~ 16018087 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000013_06941851_07005817 BTBD11A, BTBD11B, BTBD11 coding CI01000013 null 6941851 ~ 7005817 (+)
bowfin (Amia calva) AMCG00012737 btbd11a,btbd11,LOC107757250,LOC107694300,LOC107592010 coding CM030125.1 CM030125.1 6100581 ~ 6101610 (+)