XLOC_013324


Basic Information

Item Value
gene id XLOC_013324
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 15991454 ~ 16018087 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027280
GGATCTCCTGTGGATCATCTACAGTCAAATCCTCACTGCCGTAACCACCGCTCTTCTCCACCCACAGCTCTGATTTCTCCACTGTCAGACGCAGCTGATCTAGGCTCGCTTTAATCTTCTTATAATTCTCCACATCCTCCTCAGAAACCAGCAACTGGACCTGCAGAACCAAGATCAGCATCCAATGATTCTCATCAAAACTGTTCACCAGACCCTCAatacactagctatgtttccatctaaagttGTAAATTTACA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027280 True 258 lncRNA 0.45 2 15991454 16018087

Neighbor

gene id symbol gene type direction distance location
XLOC_013323 NA coding downstream 20881 15939261 ~ 15970573 (-)
XLOC_013322 plekhg7 coding downstream 58750 15887830 ~ 15932704 (-)
XLOC_013321 CR854977.1 coding downstream 115674 15875662 ~ 15875780 (-)
XLOC_013320 si:ch211-219a15.3 coding downstream 219900 15770461 ~ 15771554 (-)
XLOC_013318 arntl2 coding downstream 380598 15569627 ~ 15610856 (-)
XLOC_013325 sspn coding upstream 93098 16111185 ~ 16123222 (-)
XLOC_013326 slc6a15 coding upstream 133687 16151774 ~ 16181952 (-)
XLOC_013327 NA coding upstream 206703 16224790 ~ 16307937 (-)
XLOC_013328 rassf9 coding upstream 296504 16314591 ~ 16320585 (-)
XLOC_013329 NA coding upstream 354123 16372210 ~ 16377341 (-)
XLOC_013384 BX323829.1 misc upstream 3524015 19542102 ~ 19542231 (-)
XLOC_013319 BX928740.1 non-coding downstream 403253 15588087 ~ 15588201 (-)
XLOC_013310 NA non-coding downstream 799642 15188017 ~ 15191812 (-)
XLOC_013308 BX649610.1 non-coding downstream 955185 15036151 ~ 15036269 (-)
XLOC_013345 NA non-coding upstream 1473234 17491321 ~ 17492706 (-)
XLOC_013349 NA non-coding upstream 1759440 17777527 ~ 17786790 (-)
XLOC_013351 NA non-coding upstream 2093907 18111994 ~ 18113888 (-)

Expression


Co-expression Network