XLOC_013329


Basic Information

Item Value
gene id XLOC_013329
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 16372210 ~ 16377341 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026958
GACTTCCAGGGTTGTGTCAGCTAAAGCGCGCCATCTGTCTTTGTGGATGAATGAACGACATCGGCGACAGACCAGACTTGCAAAAGTTTGtttgaaataaacatgaatactTCTCTCTAAAGAAATGCGAAATCAACTtgaaaatactacagtgtttctCTAAATCTGCACAGTTATGGATTACAAACTAATGGAAAAAGCCAGATTCACCAGCTCTTGGGGTTGACAGCTGTATGACCCAGCAATTTCCACATTTTCAGCTCAGGTGCAGCAAAGCCGAGGCCACAGCAACACTGCCCTTCAAAGTGGAGTGGAACTAATGCTGAGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026958 True 328 lncRNA 0.44 2 16372210 16377341

Neighbor

gene id symbol gene type direction distance location
XLOC_013328 rassf9 coding downstream 51625 16314591 ~ 16320585 (-)
XLOC_013327 NA coding downstream 64273 16224790 ~ 16307937 (-)
XLOC_013326 slc6a15 coding downstream 190258 16151774 ~ 16181952 (-)
XLOC_013325 sspn coding downstream 248988 16111185 ~ 16123222 (-)
XLOC_013324 NA coding downstream 354123 15991454 ~ 16018087 (-)
XLOC_013330 mgat4c coding upstream 10404 16387745 ~ 16590056 (-)
XLOC_013331 ampd3b coding upstream 385465 16762806 ~ 16795262 (-)
XLOC_013332 admb coding upstream 421513 16798854 ~ 16801033 (-)
XLOC_013333 swap70b coding upstream 499492 16876833 ~ 16916840 (-)
XLOC_013334 wee1 coding upstream 541085 16918426 ~ 16924221 (-)
XLOC_013384 BX323829.1 misc upstream 3164761 19542102 ~ 19542231 (-)
XLOC_013323 NA non-coding downstream 401637 15939261 ~ 15970573 (-)
XLOC_013321 CR854977.1 non-coding downstream 496430 15875662 ~ 15875780 (-)
XLOC_013319 BX928740.1 non-coding downstream 784009 15588087 ~ 15588201 (-)
XLOC_013345 NA non-coding upstream 1113980 17491321 ~ 17492706 (-)
XLOC_013349 NA non-coding upstream 1400186 17777527 ~ 17786790 (-)
XLOC_013351 NA non-coding upstream 1734653 18111994 ~ 18113888 (-)
XLOC_013355 BX470163.3 non-coding upstream 2191900 18569241 ~ 18569322 (-)
XLOC_013356 BX470163.2 non-coding upstream 2200133 18577474 ~ 18577549 (-)

Expression


Co-expression Network