XLOC_013354 (sf3b3)


Basic Information

Item Value
gene id XLOC_013354
gene name sf3b3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 18547023 ~ 18587745 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026398
GTAACAGATGGAATTCACGGCAGACCGCTAAGTGCTGTGATTGAGGATGCTCGGGGAATAACTATCATACATACAAACTGCACATGTTCGGACAGTACTGATGTGCGCCAACAGAACTGCGAGGCCCTCTGTCGTTCCAGCGCCGTTTGAAATAACGAGCGATCAggccaatgaaaaataaaagtttctcATCTGATTGAAATCTACAACATCCTGGTTGCTATTTCGGTGCTGCTTTAGCTCTTTGTCCTGAGCCTGAAGGTCCAGTGACAGCAGCCATGTTTCTGTACAACATCACCCTGCAAAGGGCAACTGGCATCTCGCATGCCATCCATGGAAACTTCTCAGGAACCAAGCAGCAGGAGATTGTTGTTTCTCGAGGAAAAATTCTGGAGCTGCTGCGTCCTGATGCCAACACCGGGAAAGTTCACACACTGCTCACTATGGAGGTGTTTGGTGTCGTCCGCTCACTCATGGCCTTCAGGTTGACGGGTGGAACTAAAGACTACGTTGTGGTGGGCAGTGACTCTGGTCGTATTGTGATCCTGGAGTACCATCCTTCCAAGAACATGTTTGAAAAGATCCACCAGGAGACCTTTGGCAAGAGTGGCTGCAGACGCATTGTGCCTGGGCAGTTTCTTGCTGTTGATCCTAAGGGAAGAGCTGTAATGATAGGTGCCACAGAGAAACAGAAGTTGGTTTACATCCTGAATAGAGATGCAGCAGCTCGCCTTACCATCTCCTCCCCTCTAGAGGCTCACAAGGCTAATACACTTGTCTACCATGTGGTTGGTGTGGACGTGGGCTTTGAGAACCCCATGTTTGCCTGCCTGGAGATGGACTATGAGGAAGCAGATAATGATCCcactggagaagcagcagcaaaCACACAGCAGACTTTGACCTTCTATGAGTTGGACTTGGGTCTCAACCATGTGGTTCGCAAGTACAGCGAGGCTCTGGAGGAACATGGCAACTTCCTCATCACAGTTCCCGGTGGTTCGGATGGTCCCAGTGGTGTGCTCATTTGTTCTGAGAATTATATCACCTACAAAAATTTCGGTGACCAGCCAGACATCCGTTGCCCAATCCCACGCAGGAGGAATGACCTGGATGACCCTGAGCGAGGCATGATCTTTGTCTGCTCTGCCACCCACAAGACCAAAtctatgtttttctttttagccCAGACTGAACAGGGCGACATCTTTAAGGTTACACTGGAAACCGATGAGGAAATGGTGACAGAGATTAGAATGAAATATTTTGACACCATCCCAGTGGCCACAGCAATGTGTGTTCTGAAGACTGGATTCTTATTTGTTTCTTCAGAGTTTGGAAaccacTACCTGTATCAGATTGCCCACTTgggtgatgatgatgaagaaccAGAGTTTTCTTCTGCCATGCCTTTGGAGGAGGGAGACACCTTCTTTTTCCAACCTCGTCCCCTTAAAAACCTAGTGCTGGTGGACGAGCAAGAAAGTCTTTCACCCATCATGTCCTGCCAGATTGCCGATTTGGCTAATGAAGACACCCCGCAGCTGTATGTGGCGTGTGGCAGAGGACCCAGATCTACATTGAGGGTTTTGAGACACGGACTGGAGgtgtcGGAAATGGCTGTTTCAGAACTCCCTGGTAACCCCAATGCTGTGTGGACCGTCAGAAGACATGTTGAAGATGAGTTTGATGCCTACATCATTGTGTCCTTCGTCAATGCCACCCTGGTACTTTCGATTGGTGAGACTGTGGAGGAAGTGACAGATTCTGGTTTCTTGGGAACAACACCCACCCTGTCCTGCTCGTTGCTCGGGGAAGATGCACTTGTTCAAGTGTACCCTGATGGAATCCGTCACATCCGCGCGGATAAAAGAGTGAATGAGTGGAAGACTCCGGGAAAGAAAACAATCATTCGATGTGCTGTCAATCAGAGACAGGTGGTGATTGCTTTGACTGGCGGAGAACTGGTCTACTTTGAGATGGATCCGTCTGGACAGCTGAATGAATACACAGAGAGGAAGGAGATGTCTGCTGATGTTGTGTGCATGAGTTTGGCAAATGTGCCCCCTGGTGAGCAGCGTTCCCGTTTCCTGGCTGTTGGTTTGGTGGACAATACCGTCCGCATCATCTCTCTGGATCCATCCGACTGTTTGCAGCCATTAAGTATGCAGGCTCTTCCAGCCCAGCCAGAGTCTCTTTGTATTGTGGAGATGGGTGGAGTGGAAAAACAGGATGAGCTGGGAGAAAAGGGCACCATTGGCTTCTTGTACCTTAATATTGGCCTGCAGAACGGAGTGTTATTGCGTACTGTGTTGGATCCAGTAACTGGGGACCTGTCTGATACTCGAACTCGGTATCTCGGCTCTCGTCCTGTCAAGCTTTTTAGAGTCCGGATGCAGGGCCAAGAAGCTGTTCTGGCCATGTCCAGTCGTTCCTGGCTGAGTTACTCATACCAGTCTCGATTCCACTTGACGCCACTGTCATATGAAACCTTGGAGTATGCTTCAGGCTTTGCTTCAGAGCAGTGTCCTGAGGGTATCGTTGCCATTTCCACCAACACACTGAGGATTTTGGCTCTTGAGAAACTGGGTGCCGTCTTCAACCAGGTTGCTTTCCCACTGCAGTACACGCCTCGCAAGTTTGTCATCCACCCAGAGACCAACAACCTGATCCTGATCGAAACCGACCACAATGCCTACACTGAAGCCACCAAAGCCCAGCGCAAGCAGCAGATGGCTGAGGAAATGGTGGAGGCAGCAGGAGAGGATGAAAGGGAGCTGGCAGCAGAAATGGCAGCAGCTTTCTTGAATGAGAATCTGCCAGAAGCCATCTTTGGGGCACCTAAAGCAGGCTCTGGGCAATGGGCCTCACTTGTACGCTTGATCAACCCCATCCAGGGCAACACATTGGACCTGGTGCAGCTGGAGCAGAATGAGGCAGCTTTCAGTGTGGCTATTTGCCGCTTTCTGAATGGAGGAGATGACTGGTACGTGTTGGTGGGTGTTGCAAGAGATATGATACTCAATCCACGCTCTGTTGGCGGAGGATATATTTATACCTATCGGATAGTTGGAGGTGGGGACAAGCTGGAGTTTTTGCACAAGACCCCTGTGGAGGACGTGCCCCTGGCTATTGCTCCATTTCAGGGACGGGTTTTGGTTGGAGTGGGCAAGCTCTTGCGCATCTATGATTTGGGAAAGAAAAAACTTCTCCGCAAGTGTGAAAACAAGCATGTTCCTAATTTAGTGACAGGCATCCACACTATCGGCCAGCGTGTGATTGTTTCAGATGTTCAGGAGAGTCTGTTCTGGGTGCGCTATCGCCGCAATGAGAACCAACTCATCATCTTTGCTGACGATACTTATCCTCGGTGGATCACCACTGCCTGTCTGCTTGATTATGACACAATGGCTTCAGCGGATAAGTTTGGAAATATCTGCGTTGTTCGCCTTCCCCCAAACACCAGCGATGATGTTGATGAGGACCCCACAGGGAACAAAGCATTGTGGGACAGAGGCTTGCTTAACGGAGCTTCACAAAAGGCTGAGATCATCATCAACTATCACATAGGAGAGACTGTGCTGTCGCTCCAGAAAACCACACTCATCCCTGGAGGATCCGAGTCTCTGGTGTACACCACACTATCTGGAGGCATTGGCATCCTGGTTCCCTTCACCTCTCATGAGGATCACGATTTCTTCCAGCACTTGGAAATGCACATGCGCTCAGAGTTTCCTCCTCTGTGTGGTCGAGATCATCTCAGCTTCCGCTCATACTATTTCCCTGTCAAGAATGTGATTGACGGAGACCTGTGTGAGCAGTTTAACTCTATGGATCCTCATAAGCAGAAGAGTGTCTCTGAGGAGTTGGACCGTACACCTCCAGAAGTGTCAAAGAAACTGGAAGACATCCGAACACGCTATGCCTTCTAGGATCTTCACATCTGGCAGGCGCACCATGAGAAAATCAATTGTTTTTCCGGGCTTCCCATGGCTGTGGGCATCAAACTTTCCTACCACAAGTATAGGAGCTGCAATCTGGTGACTGCTGAAGGAAGTTCCCCATTTAACTGGGGCCAGATGGGAGCTGTCAAACTCCCAGTGGTCAATGACCCGGTCCTGCTTGAAATGACTGTCAGTACTGTACTCGGTACAAAGCGTTTCAGTTTTTTAGTTCATACTGAGTGGCTGCATAGATACAAATCTTTTCAGAAGTATGCTTTCATGCATCAGCCCATATACAAGAATGAATTTTATTTGTGTGGATAAAAGTCTATTACTAATTTTGTAGCTATACCACAGTGCGAACGAAATCCAGCTCAATCCACATTTTGCTGTATGAATCAGTCTGCATAAAACCGTTCCATCATTCGTGTCTCGGGTATTTAAATAATTTCTCAAAGCATAAAAAGATGTTTCCACTCTTGTAAAAACAGTGAAATTGTAAAATAGCTTTAGTTTTTGTCTCTACGTGGAAACAGCAAATTTGTGGTTTGTAACTACTGCTTTTTTGTGGAAAGGCCATAAATATCCACAACCCCAAAAAAAGAAATCGGGCTGTTTTTGTCAAAGTGTGAGAAtttgtaaataaactttttttttactttgtcctGTATTTCCGTGTCTGTCACAAGACTCTCTGTTTGTCTGTAACTGAGCCCACAGGCAAAGCAGGTTTTTActgctgttttctttttcttttttttttctttttttggtggaagcCCAATAGTGATCATGCATCTTTCTCATGACGATGAGTCATGTTGTGTACAATCCCTTAAAATTGTTATTCAGTTTTAGTCACTTAAAAgatgaaagtttaaagcatttaGTTTCTTTAGGCTCACCAAATACTGTGtagaaagctttaaaaaaaaactttaggtaCAGTTTTCTCAGATTGCTGCATGGCCactactttaaagggcacctatgatgaaaatcaacttttggacataactgtgtatatgtatagtgcgTCCAGTCATATTGGAGTGCTATAAACCTAGTaagtctcttttaaaaaaaattcctaaTGCTAAAATAGGACCCatatcccagtgattttgaggcccactgcaacgtgacataggaggGCTGTTTTCCCTGCCTTCTGAAATTATTGACTGGTGCCATGTTTCTAAAATGTCATGTATACACGTCCacagaatattcatttacaaagaaATGGATTAAAACATGTTACAACTCGGTGACCATCTGCActtcaataattaattttctaAGTTTAAAACTTTTCTAAAACAgcttgtttgtaataaagacagtaaaatcattatgtaattcttaactgctAAAATTACCATggccacatggtgtcagtaaatgcgcttatgtgtgtgtgtgaactgtagATGGCATTTGTGTGACTCATTAGCTATGTttacatccaaaaatgcgaattaacttcTTGTGCAAaattggaatatcgcataaaagatgtgcgaataaagaaGCATTTCCATTCAACGAGtctaagagaacaaaatcgtcacttcctgattaactggcgacaaatatcaaaagtaaaaatagaATTTGCTGTGGGttgagaagctgcgtcaattttttttttcatttaataaatgacttaagAAGGCAACCCTGACACAGTGAACGCAaggtggtgtttgaaggtgtcagaagcagagcccagacgctgttgattctggaggtcattgaAATTATAATAActctaatactgaaatggttaaagtgttttttttaaatgaccaaatcaacatttcagatgttttacagtgtgctcagtttgctggtttatccatttacacacattttcatcatcacatgatctcttataacaaaatcacattttaatgtgcatactagaatttattcagtaaagtgtttccatcgcagttcaTGCACATCtattcttatcgaataaaaaatgtttattctaCTCGCTTATGCGCATaaccaaaattttttttaaatgtatgcgcatcttggcatttccatcaactgttttttttttttttaatcttaaatgcgcataaaaatagatgTAAACGAAGCTATTGTTTCAGAAAAGCTTGAATAAACTTTACCACAAATACTTCAAAttaacttacttggtatttttcaCTAATgggctgtatttcagcttcatccgtgtctgtctctatcactgactgctgtttatctactGTAACACAGCAGAAGCAGACATACATGTGGGtgcggtgggcggggagaagcagttcatttggatttaaagccacagacTACAATAACAGCTACACTTACCAGACACCAAAATAGCCAAattctacattatataataaatcatttgatgGGTATTTGCGTCTAAACTtttgacacattctggagacacaaaaggcttgtaacatcttgtaaaaggggtaaagtCGGTGCCCTTTAACTTGATGAATcagttttttaaagggatagttaaggGAGGATTTACTCGCTATTTACACCACTGGTTGCAAACCTTTTTCTGTTGGACGCAAAAGATAGTAGTGGTTAccatagtagtagtaaaaaacatactatggaagtcaacgattACCAGTTTCCAACCTTCTTTAAAttgtcttttgtatttaacagaaagaACGGTGGAATTTTAGTTGATCTGTCCCTTTAATCATGTAACACTTTTGTTTTCCTACTCTGTGTTCTACTTATCAGCTTCATTTCACTTTCATCTCAATATCTATTTTTAATCTTGAGCAATTTGTATTCTGCACCGTCACAGGACTAAATATGAAATCTTATCGTGCAAATTCCTATTTGTGTCAAAAGAGGATTTCACTCTATGAAtcatcattcagtcattttctccTCATTATTGCCTGCAGTCAGTGAACCAAAACACAGATCAACTATCCTAACTATTTAATTTGAATGAGTTATGTCCTGTTCTCGCCAAAACCCACAATTGTCAACGACACCGGTGGTCTCCGCTACACCTATGCTCTGCTTATCACTTTAATAGCactattaataaataacaaataatataaagtcattattttactTGACGTAGCATgagcactgtcatcatggcaaagataaaataaatcaggtattagaaatgagttattaaaactattatgtttagaaatgtgctgaaacaatcttccctccgttaaacagaaattgggggggggggggggaacaggggcgttaataattcaggggggctcataattttgacttcaactgtatatgttattgaaaaatataaaatgcCAATTTAAAAGAGggaaaatcaagaaaagcaaaaaaaaatgtgttgaaattttgtaggttgtaattctaattttttattttttattttctgtttgaattgaattgtattatctttcaatttctcagtatgtttgatgactaaaatattattttaataaatatatgtttaatgaatctgttttgtttaaatgcaccaaaagacattgcctatattcacaaaaaaatgataaaaatacattttcaaaatggggaaGACTTTATGTCTTGGTTGGACatgttatgctgagcactgcatataCAGGTAGTTTCGTGTTTTGCAAATGTAAAACTGCAACTGCAGTGACCCCAGATTACTGCTGACTGCACCACCAGAAGTCAATTGTAGTTGTAATTTGTAATCCAAATCTTGCATGCAACACCAGTGAATGGTCAactattacatttcaaaataaacataGATGTGGATGCTAGGATAGAGTATCATCTTGGGGTCTGTGTTGATTGGGGGTCTTCTGTGGGATAACATAATTCATGGGATCCTTAGAATGTTTTGCCCACTCGAAATTCTTTCGTGAATTGAAGAGCCTTCCCTGGTGAAGATGTGAGGACATAAAGAAGGTTGAGATATTTCAGAGAGTGCTTGTAACCTGGTGACGTTTAGTGGCACATTTGGAAGTTTGCATTCCCCACTCTTCCTTTGGGGGGCTTTCCATATTGATGTGATGTAATCTGGGTTGACAGATG
>TCONS_00026399
ataaaagtttctcATCTGATTGAAATCTACAACATCCTGGTTGCTATTTCGGTGCTGCTTTAGCTCTTTGTCCTGAGCCTGAAGGTCCAGTGACAGCAGCCATGTTTCTGTACAACATCACCCTGCAAAGGGCAACTGGCATCTCGCATGCCATCCATGGAAACTTCTCAGGAACCAAGCAGCAGGAGATTGTTGTTTCTCGAGGAAAAATTCTGGAGCTGCTGCGTCCTGATGCCAACACCGGGAAAGTTCACACACTGCTCACTATGGAGGTGTTTGGTGTCGTCCGCTCACTCATGGCCTTCAGGTTGACGGGTGGAACTAAAGACTACGTTGTGGTGGGCAGTGACTCTGGTCGTATTGTGATCCTGGAGTACCATCCTTCCAAGAACATGTTTGAAAAGATCCACCAGGAGACCTTTGGCAAGAGTGGCTGCAGACGCATTGTGCCTGGGCAGTTTCTTGCTGTTGATCCTAAGGGAAGAGCTGTAATGATAGGTGCCACAGAGAAACAGAAGTTGGTTTACATCCTGAATAGAGATGCAGCAGCTCGCCTTACCATCTCCTCCCCTCTAGAGGCTCACAAGGCTAATACACTTGTCTACCATGTGGTTGGTGTGGACGTGGGCTTTGAGAACCCCATGTTTGCCTGCCTGGAGATGGACTATGAGGAAGCAGATAATGATCCcactggagaagcagcagcaaaCACACAGCAGACTTTGACCTTCTATGAGTTGGACTTGGGTCTCAACCATGTGGTTCGCAAGTACAGCGAGGCTCTGGAGGAACATGGCAACTTCCTCATCACAGTTCCCGGTGGTTCGGATGGTCCCAGTGGTGTGCTCATTTGTTCTGAGAATTATATCACCTACAAAAATTTCGGTGACCAGCCAGACATCCGTTGCCCAATCCCACGCAGGAGGAATGACCTGGATGACCCTGAGCGAGGCATGATCTTTGTCTGCTCTGCCACCCACAAGACCAAAtctatgtttttctttttagccCAGACTGAACAGGGCGACATCTTTAAGGTTACACTGGAAACCGATGAGGAAATGGTGACAGAGATTAGAATGAAATATTTTGACACCATCCCAGTGGCCACAGCAATGTGTGTTCTGAAGACTGGATTCTTATTTGTTTCTTCAGAGTTTGGAAaccacTACCTGTATCAGATTGCCCACTTgggtgatgatgatgaagaaccAGAGTTTTCTTCTGCCATGCCTTTGGAGGAGGGAGACACCTTCTTTTTCCAACCTCGTCCCCTTAAAAACCTAGTGCTGGTGGACGAGCAAGAAAGTCTTTCACCCATCATGTCCTGCCAGATTGCCGATTTGGCTAATGAAGACACCCCGCAGCTGTATGTGGCGTGTGGCAGAGGACCCAGATCTACATTGAGGGTTTTGAGACACGGACTGGAGgtgtcGGAAATGGCTGTTTCAGAACTCCCTGGTAACCCCAATGCTGTGTGGACCGTCAGAAGACATGTTGAAGATGAGTTTGATGCCTACATCATTGTGTCCTTCGTCAATGCCACCCTGGTACTTTCGATTGGTGAGACTGTGGAGGAAGTGACAGATTCTGGTTTCTTGGGAACAACACCCACCCTGTCCTGCTCGTTGCTCGGGGAAGATGCACTTGTTCAAGTGTACCCTGATGGAATCCGTCACATCCGCGCGGATAAAAGAGTGAATGAGTGGAAGACTCCGGGAAAGAAAACAATCATTCGATGTGCTGTCAATCAGAGACAGGTGGTGATTGCTTTGACTGGCGGAGAACTGGTCTACTTTGAGATGGATCCGTCTGGACAGCTGAATGAATACACAGAGAGGAAGGAGATGTCTGCTGATGTTGTGTGCATGAGTTTGGCAAATGTGCCCCCTGGTGAGCAGCGTTCCCGTTTCCTGGCTGTTGGTTTGGTGGACAATACCGTCCGCATCATCTCTCTGGATCCATCCGACTGTTTGCAGCCATTAAGTATGCAGGCTCTTCCAGCCCAGCCAGAGTCTCTTTGTATTGTGGAGATGGGTGGAGTGGAAAAACAGGATGAGCTGGGAGAAAAGGGCACCATTGGCTTCTTGTACCTTAATATTGGCCTGCAGAACGGAGTGTTATTGCGTACTGTGTTGGATCCAGTAACTGGGGACCTGTCTGATACTCGAACTCGGTATCTCGGCTCTCGTCCTGTCAAGCTTTTTAGAGTCCGGATGCAGGGCCAAGAAGCTGTTCTGGCCATGTCCAGTCGTTCCTGGCTGAGTTACTCATACCAGTCTCGATTCCACTTGACGCCACTGTCATATGAAACCTTGGAGTATGCTTCAGGCTTTGCTTCAGAGCAGTGTCCTGAGGGTATCGTTGCCATTTCCACCAACACACTGAGGATTTTGGCTCTTGAGAAACTGGGTGCCGTCTTCAACCAGGTTGCTTTCCCACTGCAGTACACGCCTCGCAAGTTTGTCATCCACCCAGAGACCAACAACCTGATCCTGATCGAAACCGACCACAATGCCTACACTGAAGCCACCAAAGCCCAGCGCAAGCAGCAGATGGCTGAGGAAATGGTGGAGGCAGCAGGAGAGGATGAAAGGGAGCTGGCAGCAGAAATGGCAGCAGCTTTCTTGAATGAGAATCTGCCAGAAGCCATCTTTGGGGCACCTAAAGCAGGCTCTGGGCAATGGGCCTCACTTGTACGCTTGATCAACCCCATCCAGGGCAACACATTGGACCTGGTGCAGCTGGAGCAGAATGAGGCAGCTTTCAGTGTGGCTATTTGCCGCTTTCTGAATGGAGGAGATGACTGGTACGTGTTGGTGGGTGTTGCAAGAGATATGATACTCAATCCACGCTCTGTTGGCGGAGGATATATTTATACCTATCGGATAGTTGGAGGTGGGGACAAGCTGGAGTTTTTGCACAAGACCCCTGTGGAGGACGTGCCCCTGGCTATTGCTCCATTTCAGGGACGGGTTTTGGTTGGAGTGGGCAAGCTCTTGCGCATCTATGATTTGGGAAAGAAAAAACTTCTCCGCAAGTGTGAAAACAAGCATGTTCCTAATTTAGTGACAGGCATCCACACTATCGGCCAGCGTGTGATTGTTTCAGATGTTCAGGAGAGTCTGTTCTGGGTGCGCTATCGCCGCAATGAGAACCAACTCATCATCTTTGCTGACGATACTTATCCTCGGTGGATCACCACTGCCTGTCTGCTTGATTATGACACAATGGCTTCAGCGGATAAGTTTGGAAATATCTGCGTTGTTCGCCTTCCCCCAAACACCAGCGATGATGTTGATGAGGACCCCACAGGGAACAAAGCATTGTGGGACAGAGGCTTGCTTAACGGAGCTTCACAAAAGGCTGAGATCATCATCAACTATCACATAGGAGAGACTGTGCTGTCGCTCCAGAAAACCACACTCATCCCTGGAGGATCCGAGTCTCTGGTGTACACCACACTATCTGGAGGCATTGGCATCCTGGTTCCCTTCACCTCTCATGAGGATCACGATTTCTTCCAGCACTTGGAAATGCACATGCGCTCAGAGTTTCCTCCTCTGTGTGGTCGAGATCATCTCAGCTTCCGCTCATACTATTTCCCTGTCAAGAATGTGATTGACGGAGACCTGTGTGAGCAGTTTAACTCTATGGATCCTCATAAGCAGAAGAGTGTCTCTGAGGAGTTGGACCGTACACCTCCAGAAGTGTCAAAGAAACTGGAAGACATCCGAACACGCTATGCCTTCTAGGATCTTCACATCTGGCAGGCGCACCATGAGAAAATCAATTGTTTTTCCGGGCTTCCCATGGCTGTGGGCATCAAACTTTCCTACCACAAGTATAGGAGCTGCAATCTGGTGACTGCTGAAGGAAGTTCCCCATTTAACTGGGGCCAGATGGGAGCTGTCAAACTCCCAGTGGTCAATGACCCGGTCCTGCTTGAAATGACTGTCAGTACTGTACTCGGTACAAAGCGTTTCAGTTTTTTAGTTCATACTGAGTGGCTGCATAGATACAAATCTTTTCAGAAGTATGCTTTCATGCATCAGCCCATATACAAGAATGAATTTTATTTGTGTGGATAAAAGTCTATTACTAATTTTGTAGCTATACCACAGTGCGAACGAAATCCAGCTCAATCCACATTTTGCTGTATGAATCAGTCTGCATAAAACCGTTCCATCATTCGTGTCTCGGGTATTTAAATAATTTCTCAAAGCATAAAAAGATGTTTCCACTCTTGTAAAAACAGTGAAATTGTAAAATAGCTTTAGTTTTTGTCTCTACGTGGAAACAGCAAATTTGTGGTTTGTAACTACTGCTTTTTTGTGGAAAGGCCATAAATATCCACAACCCCAAAAAAAGAAATCGGGCTGTTTTTGTCAAAGTGTGAGAAtttgtaaataaactttttttttactttgtcctGTA
>TCONS_00026400
GGAACAACCTGCTGAGCCATGTTGACCAAAACCTCTTTCTTGTTCTTGCAGCATGTTCCTAATTTAGTGACAGGCATCCACACTATCGGCCAGCGTGTGATTGTTTCAGATGTTCAGGAGAGTCTGTTCTGGGTGCGCTATCGCCGCAATGAGAACCAACTCATCATCTTTGCTGACGATACTTATCCTCGGTGGATCACCACTGCCTGTCTGCTTGATTATGACACAATGGCTTCAGCGGATAAGTTTGGAAATATCTGCGTTGTGAGTGTCGCCACCTGCTTTGTTTTGAAACCTTTGAGACCAGTGTGCTCTATAGTCTGTTTGTCAAGCCAATATGACCAAAACAAACGTAAAAAATATTCCCctgtaaataattacatttaaacattttattttttagtaaatgcGTTTGAGAATGAAAGTGGCATGCTAAATGTATGCTAAATCTTTATTAGGTTCGCCTTCCCCCAAACACCAGCGATGATGTTGATGAGGACCCCACAGGGAACAAAGCATTGTGGGACAGAGGCTTGCTTAACGGAGCTTCACAAAAGGCTGAGATCATCATCAACTATCACATAGGAGAGACTGTGCTGTCGCTCCAGAAAACCACACTCATCCCTGGAGGATCCGAGTCTCTGGTGTACACCACACTATCTGGAGGCATTGGCATCCTGGTTCCCTTCACCTCTCATGAGGATCACGATTTCTTCCAGCACTTGGAAATGCACATGCGCTCAGAGTTTCCTCCTCTGTGTGGTCGAGATCATCTCAGCTTCCGCTCATACTATTTCCCTGTCAAGAATGTGATTGACGGAGACCTGTGTGAGCAGTTT

Function

symbol description
sf3b3 Predicted to enable U2 snRNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be part of U2 snRNP and U2-type precatalytic spliceosome. Predicted to be active in nucleus. Orthologous to human SF3B3 (splicing factor 3b subunit 3).

GO:

id name namespace
GO:0006397 mRNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0008380 RNA splicing biological_process
GO:0005634 nucleus cellular_component
GO:0005681 spliceosomal complex cellular_component
GO:0071005 U2-type precatalytic spliceosome cellular_component
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
ko03040 Spliceosome
ko03021 Transcription machinery
ko03041 Spliceosome
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-040426-2901 Predicted to enable U2 snRNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be part of U2 snRNP and U2-type precatalytic spliceosome. Predicted to be active in nucleus. Orthologous to human SF3B3 (splicing factor 3b subunit 3).

Ensembl:

ensembl_id ENSDARG00000103553

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026398 False 8009 mRNA 0.42 28 18547023 18587745
TCONS_00026399 False 4437 mRNA 0.48 27 18550418 18584839
TCONS_00026400 True 839 lncRNA 0.45 4 18551208 18555561

Neighbor

gene id symbol gene type direction distance location
XLOC_013353 il34 coding downstream 3665 18527170 ~ 18543358 (-)
XLOC_013352 lonp2 coding downstream 22399 18475674 ~ 18524624 (-)
XLOC_013350 CR387935.1 coding downstream 424054 18087260 ~ 18122969 (-)
XLOC_013351 NA coding downstream 433135 18111994 ~ 18113888 (-)
XLOC_013349 NA coding downstream 760233 17777527 ~ 17786790 (-)
XLOC_013358 NA coding upstream 41321 18629066 ~ 18634673 (-)
XLOC_013359 aars1 coding upstream 48528 18636273 ~ 18821929 (-)
XLOC_013360 BX649641.5 coding upstream 108462 18696207 ~ 18701764 (-)
XLOC_013361 NA coding upstream 126228 18713973 ~ 18727032 (-)
XLOC_013362 NA coding upstream 156717 18744462 ~ 18749405 (-)
XLOC_013384 BX323829.1 misc upstream 954357 19542102 ~ 19542231 (-)
XLOC_013345 NA non-coding downstream 1054317 17491321 ~ 17492706 (-)
XLOC_013329 NA non-coding downstream 2169682 16372210 ~ 16377341 (-)
XLOC_013327 NA non-coding downstream 2239086 16224790 ~ 16307937 (-)
XLOC_013363 NA non-coding upstream 199639 18787384 ~ 18793265 (-)

Expression


Co-expression Network