CI01000330_03651998_03657102 (DNAJA4)


Basic Information

Item Value
gene id CI01000330_03651998_03657102
gene name DNAJA4
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000330
NCBI id null
chromosome length 4651236
location 3651862 ~ 3658416 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000330_03651998_03657102.mRNA
ACTGAAAGTTTTAGGTTGTTAAATAGCGACCTCTGCTGGGCATTTGCCAGAACAGACCTAATTTCTCCGACTTCTCCAAAGTTAAATGGGTTGTCGGAATGAAACTTGGGAAGATCTCCTCACTTTAATTCAGAAACCCCATAAAGATTTACTTTGCCTTACTTAGTGACTTAGCACTCCATATTCTAATATCTGATTAATATTTTTTATTATTATTTTTTAATGCCAACCGACAGAAATACTGCTTTAGTGACAATATTTCGACATGCATCTCACATTTATTCAGAAAATGTAAAAATATGCTTTATATATTACTCTAAAACAGGGGTTCTCAATCGTTTAGATGCCACAGACCCCCATATATAATCATTTTTATGTGAGGGTCCCCCGTCCAAAAATTTAAAAGGCAGCTAGGCTATACATGTTTAATAATAAATATTGTAAATGTTGGTGAAATATTTTTTGTAAAATATTAGGTTCATTGTTTTCTACTCACTATAGTACTGTATTGTTTATTTGTATATTTTTATCTAATATTTATTTAATTATTTATAATTTGTATTCTAATCTATTTTTATTTAATCTTTTTGTTATGTATTTATCTATTTATTTTAATCTTAGTATCTATTTTTAGCCTACTTGCTGTTTTTCTCTGAACATTTCCACAGACCCACACGCAGTTTGAAAACCGCTCTAAAACATCATGCAAATCCATTATAGGCTAACATACATTATTTGGTAGCATTCATACTTGGCAGCTTAAAACTCATAAATATTAGTCTAGTCTCAGATCGAATGGGAAGCGGTCTGTCTGCCCTCTTTCTTTCAACACATCCCATCTATTCTTCGCATAGAAGGTTCCGGCGCTCGAGCTCGAGAAGGTTCTGGAGCGCCACCGTTTATATAAGAGCGACAGCGCGCGCTGCGTTTAGCCAGCAGAACAACACTGAGAGAGAGAGACGAACCCGGCGACACAGCGAACCGGCTTTTCCACTCCTTTTTATTTGAGTGAGTATTATCAAACTTATAACATGCACAAATACAATCCTGAAGCTTTAGCTGAAGTGTTCTCTAGACTTATTCACAAATTTAACAGTTTCGAGGAATGCTGTGTGACACGTTAGCTTCTCTCAAGAACTAACAGTGTGCGACCAATATCCTCAATAAACATGCACTGATATTAATGTATCATATATATGTCTAGTGGCATGATTAAACTTGGTTTAAAGCTTAACAATGTCATATGCATACTCTTGAAGTGAGCAAGACTGTTGATGTTATTTTTCAGTATACTGTAGTTGATTCCTATCAAAGATGGTTCGAGAAACCGGTTACTACGACCTGCTCGGCGTGAGTCCCAAAGCCTCGCTGGACGAGATCAAAAAAGCATATCGGAAACTGGCATTGAAATATCATCCGGATAAGAACCCGAATGAAGGCGAGAAATTTAAACTCATATCACAAGCCTATGAGGTCCTGTCAGATCCCAAAAAGCGGGATTTGTATGACCAAGGTGGTGAACAAGCCATCAAGGAGGGAGGCATGGCAGGAGGAGAATCTCCCATGGACATTTTCAACATGTTCTTTGGTGGCGGAGGCAGAATGCAGAGAGAAAGGAGAGGTAAGAATGTGGTTCACCAGCTTGGGGTCACACTGGAGGAATTGTACAATGGCTCAACGAGGAAACTTGGTCTTCAGAAGAATGTTATCTGTGAGAAATGTGAAGGTTATGGAGGCAAAAAAGGCACAATTGAAAAATGCTCAACTTGCAAAGGAAGAGGGGTTCAGGTCCAGGTACAACAGATTGGACCCGGAATGATCCAGCAGATTCAGAGCATGTGCTCAGATTGCCAAGGACAAGGAGAGAGGTTCAACTCCAAGGACCGCTGCAAAAACTGCAATGGACACAAAGTAGAGCGCAAGAAGAAGATTCTTGAAGTCCACATTGACAAAGGTATGAAGGATGGGCAGAAAATCACATTCCATGGAGAAGGAGATCAAGAGCCTGGACTGGAGCCTGGTGATGTTATAATCGTACTAGACTTGAAAGAACACCCTGTCTTCCAAAGGCAGGATGACAACCTCGTCATGAAGATGAAGATCAAGCTGGTAGAGGCACTCTGTGGATTTAAAAAGACAATCCGTACTCTCGATAACAGATCACTGCTCATCCATTCTTCTCCAGAAACATTTCTGTTCCCTCAGATTGAGTTCCCAGATAAACACTGGCTACCTGAGCACATGCTGCCTGACCTGGAGAGGTTACTTCCTGGCAGAGATCACGTCATGATGTCAGATGATATGGAAGAGGTTGACCTCTGTGAAGTAGACTATGAAAGGCAAAAGAGAAACCACAGTGGTGAAGCCTACGATGAAGATGAAGGCCCCAGGCATGGTGGAGTCCAATGCCAGACTCAATAAGTGTCATATAAGGAACATCTGTGCAATACTTCTTGAAATATGACCTCAAGTGTACACTGAATATTAGGGCGGTTAAATTTAGTTCTTGCCGAGCAATACACACAGCAAGGATTTCCCCCTACCAAAGCCTTATAAA

Function

symbol description
dnaja4 Enables chaperone binding activity and unfolded protein binding activity. Involved in several processes, including negative regulation of endothelial cell migration; negative regulation of inclusion body assembly; and protein refolding. Located in cytosol and membrane.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000330_03651998_03657102.mRNA True 2557 mRNA 0.40 6 3651862 3658416

Neighbor

gene id symbol gene type direction distance location
CI01000330_03637151_03648269 RAB8B coding downstream 1279 3636215 ~ 3650583 (-)
CI01000330_03561340_03578253 KLF13, ZNF746, ZNF467 coding downstream 73609 3561340 ~ 3578253 (-)
CI01000330_03498678_03499674 NA coding downstream 151199 3498571 ~ 3500663 (-)
CI01000330_03400974_03445121 NA coding downstream 206346 3400097 ~ 3445516 (-)
CI01000330_03388297_03389229 GCNT3 coding downstream 262034 3388208 ~ 3389828 (-)
CI01000330_03700374_03704847 IDH3A coding upstream 41270 3699686 ~ 3704847 (-)
CI01000330_03714368_03721994 LRRC61 coding upstream 55866 3714282 ~ 3722123 (-)
CI01000330_03749146_03754161 CASQ2 coding upstream 89938 3748354 ~ 3756146 (-)
CI01000330_03764674_03766773 SLC5A3 coding upstream 105113 3763529 ~ 3768843 (-)
CI01000330_03798855_03804577 NA coding upstream 140439 3798855 ~ 3804577 (-)
G475896 NA non-coding downstream 28067 3623266 ~ 3623795 (-)
G475895 NA non-coding downstream 30368 3621056 ~ 3621494 (-)
G475893 NA non-coding downstream 35821 3615794 ~ 3616041 (-)
G475891 NA non-coding downstream 38149 3613443 ~ 3613713 (-)
G475890 NA non-coding downstream 40335 3611238 ~ 3611527 (-)
G475908 NA non-coding upstream 2868 3661284 ~ 3661521 (-)
G475909 NA non-coding upstream 3123 3661539 ~ 3661745 (-)
G475910 NA non-coding upstream 3787 3662203 ~ 3662448 (-)
G475912 NA non-coding upstream 5047 3663463 ~ 3663701 (-)
G475921 NA non-coding upstream 29555 3687971 ~ 3688388 (-)
G475669 NA other downstream 584926 3066448 ~ 3066936 (-)
G475115 NA other downstream 1047116 2602974 ~ 2604746 (-)
CI01000330_01667530_01671493 NA other downstream 1980313 1666058 ~ 1671798 (-)
G474284 NA other downstream 2361893 1289555 ~ 1289969 (-)
CI01000330_01205874_01206632 NA other downstream 2444977 1205267 ~ 1206632 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G149631 rps27l,zgc:136826,LOC107598918,LOC107752326 non-coding NC_047603.1 CM018549.1 16180906 ~ 16238108 (-)