G474649


Basic Information

Item Value
gene id G474649
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000330
NCBI id null
chromosome length 4651236
location 2420372 ~ 2423606 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU544657
AGATTAATTTGCGTGGTGTGAATGCAGCATGTGTTTGAATTGTAATGCCTCTTTTACCTCGAGCGGTTGTATATGATTGGGTCGTTTTCGTCTGGTAAGGTGTTAAGCATGCCCAGCTCACGAAACATCTTCATCATGTGGTCGAGGAAGCGCTGACCTGCTGCTCTCTCTACCACGGCACTCAGCAGGGTGAAAGCATGTGTGGAATACAGGAATGTAGAACCTACAGGGGTCATATATGATAGAACAAGGTCAATATTGTCTGCAGTTGTTGTAATTTGACATGTGCACCAATAATGTGATTATTTACAACAATCAGAGTAAGCACTTAATTGCAGTAAGATGTTTACATGACACAAGCAAACCTCTTCACTCCCCTTTACATGTAATTTTCGTTATTCTGATTATTCGCTAATAATTATGGTTATTTTTATCGCCATTATTCACATACCCAAACGCACAGCATAAGTGATCAACTCACATACAGTCGGTGTGTGTTACTGGCCATAGTTTAAATAGATTTCAAGGCAAGATGCTCTAAAAATAAACCCAGCATCATCTAAAATCAGGCATTTCAGGAGACATCCAACACATAACCAGCGCTTTGTTCTGTGTGGAACGAAAGTATACCGGGTTTAAATATCAGAGGATCGTCTTTGAACAAGTCCAAAGCCTGGATGACATTCTCAAAGTTGTCTTTGAGGTAGTACTCCTCCTGCTCAAACTCTTTCTTTTTCTTTTTGCTTTTAGCGCTGCTGTCCTCCGCTTTCGGCTTCTCTTTGTTTTCAGCTAAGCCCTTCTCTTCTTTCTTCTCCGGGGGCTTCAGAAGCCGCTTCGCTTTCTCCTTGTCCTCTCTCACTTTTTTGGCATCTTTTTCATAGTGACGGATGCCACTCAAGTGAGACAGGAGCATCCGAGGTGTTATTGTGACCTGGTTTAAGGACAAAGGGAAGAATGCTAAGCCAAACCAAATTCATTATTAATAAATTATTATATACTGTATATCAGGCAATGTTGGTCCTGTAGTGCCGCAAGCTCCAATCCTAATCAAACACACCTGAACAAGCTAATCAATGTCTTCAGGATTACTAAGACTGTCTGAAATCGCACCCTATACCCTTAAATAGGGCGCTATTTGAGGGGACATCCATTTGTAGAGGTGTCCGAAACCATAGTGGATGTTATCGAGTTCACTCATTCAATCCCACAATGCACCGTAATAATGAGTAGGGCTGGGTAAAAAATATTGATTTCTCGATTTTAATCAATTCTTCTTAAATTCCAAGAATCGATTAGTCTGTTTTCAGTTGATCCCATCCAATAAATCGCAATAATCTTTGTGCTTTGTTACTTTTGATATTGGGCAAAGTCTCAGATTTCAAATGACGTCCATCTTATTATGAGATTCAAAAAATAAATACCGTTTTGGCGCTGTTTAATGTGTCGTGACAGATCGCTGTAGTGCCTCAGTTAAAGAGAAGCGGCAGCACGGAGCGCATGTGAACATCCTCTCCTCCTCTTTAATACCAGTGAGTGTTAAATAAACATGAGTATCATCTGAAGGTATGCTAAAATATACAGTACAACTTACCGAAATCCGTATCATGTCACATGAAATCGCTCAATCAGTGTTTCAACCGCGGAAAGATGTCAATAAGCTTGTAAACAATGTCATTTAACTTCACGTTTCCCTCAGAAAAACCATATTCAGTGACCATGAACTAGTCAGCTAGAAAAATGAACTCTAGAGAGCAGCATTCTGATAAATATAGCTATGCACAGTTACATATTCGTTATAATTTTTTTTCAAACGCTATAAAAGGCGACAACTTTTATTTTACTCGATTTTAACGATTTGAGAAACCATAAACGACGCAAAACATGCGAATTTTGAGTTTTTGATAGGATTCGTGTATAGAAAAATCACTCCCTGCCCTCCAGACTCATTCGCGCTGCTGCAATGGCGTCATGTGTGTTGCCACGTCTGACCAGAAGATGGCGCCCGAACACAGCCTAAGTGTACAAGGCAGGTGAGCTTTTTATCAGGATTGGAGATAAACTGCAGGACAGGGGCACTCCAGGGCCGACTTTGCCCATCCCGAGCATACATTTTCATAAGTAAAATGAGTAATAATTTGCATTAATAAATTTAATGAAAAGCCTCTTTTTAAACAGAGTACTCACATTCTCTCCTTCGAATTGCTTCTGTGGGAACTCGGGGACGTATTTTTGGACAGGGGCATCTAGATCAATTTTGCCCTCCTCCCAGAGTCTGGCGACGGCCGCTGCGGTCAGAGGTTTACTGATGCTGGCGATTCTCATCACCGTGTCGGCACCACAAGGCACTCTGTTCTCCAGATCTGCATAGCCAACGCCTCAGAGAGAACAACATACACAGCCAGGGTTCACTTTCAGAACCACTAAAACAGTTCTAAAAGTTTTCATTTTAAGCATGTGCAGAGGAAGACTTCCTACCTTCACACCAAACGTGGCTGCCATCCACTGAGACTCCAATAACCATCCCAGGAGCTCCAACTTCATCCTGAAAAATTATTTGACTTATCTGTAGGCCATTCTGCACTATAAACTTTAACATTTTGAAATTAATATTACTAATATTAATAAATATATATTATATTGTATATATATATGAACACTGATGGACACTTTACTATCCCATGAGGCCACGGGAGAGGATTTGTTTATGGCAGTGAAGCGAAGCAACTGACGCTGGGAGGTCACATGATAAGGGCAACATGGCGAATGTAGTACATCCAGATTACATTCATGCGCACATCTATACTACATAGAACATACTTTTTTAGTGGTCACAAAGTAATTACCCATTCAAAATAAGTACCTACTCAAGAGAGTATGCAATTTCGGACGCAGCCACAAAGTAGGGTGGTACTTCATTAATTCACTAGTTTTTGATGAATGGAGGCAGTTATGAAGCTTGTAGTTGATTGTGAGAAATGGGTGGTGTTTATGCGGGCTAAATGATTGTAGACGTCTGACGTCATATGTCTTTCACCAGAAGATGGCGTTATGACAGATTTGATTAAAAATAATGAGATAAAAAATAAAAAATGAATCATTCGCAGTAAGATCAACAATATTTATTTAGAAAATAGATTAGACTTCAAATGAATATTTTTAACACAATAACATTATACATGGGTCAGTGACGCGATGGGTCATTTTTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU544657 True 3206 lncRNA 0.40 2 2420372 2423606

Neighbor

gene id symbol gene type direction distance location
CI01000330_02379648_02379944 NA coding upstream 40039 2377388 ~ 2380333 (+)
CI01000330_02280397_02289394 ETFA coding upstream 130760 2280397 ~ 2289612 (+)
CI01000330_02270814_02271081 NA coding upstream 148840 2270814 ~ 2271532 (+)
CI01000330_02133497_02266195 SCAPER coding upstream 154131 2133497 ~ 2266241 (+)
CI01000330_02116696_02127182 CTDSPL2A coding upstream 293141 2116580 ~ 2127231 (+)
CI01000330_02590806_02597446 NA coding downstream 166485 2590091 ~ 2597586 (+)
CI01000330_02657515_02658888 NA coding downstream 233583 2657189 ~ 2659010 (+)
CI01000330_02924840_02955205 NA coding downstream 499407 2923013 ~ 2955282 (+)
CI01000330_03068141_03070654 NA coding downstream 644216 3067822 ~ 3071125 (+)
CI01000330_03111967_03139685 RORAA, RORA coding downstream 687630 3111236 ~ 3139744 (+)
G474640 NA non-coding upstream 1209 2385760 ~ 2419163 (+)
G474724 NA non-coding upstream 154939 2265146 ~ 2265433 (+)
G474715 NA non-coding upstream 321389 2098779 ~ 2098983 (+)
G474710 NA non-coding upstream 322182 2080746 ~ 2098190 (+)
G474687 NA non-coding upstream 416362 2003445 ~ 2004010 (+)
G474668 NA non-coding downstream 2578 2426184 ~ 2426492 (+)
G474647 NA non-coding downstream 10716 2434322 ~ 2437952 (+)
G474763 NA non-coding downstream 49791 2473397 ~ 2473727 (+)
G474764 NA non-coding downstream 53655 2477261 ~ 2477474 (+)
G474777 NA non-coding downstream 87850 2511456 ~ 2514764 (+)
G474750 NA other upstream 20694 2394157 ~ 2399678 (+)
CI01000330_02046876_02054740 NA other upstream 371115 2046781 ~ 2054740 (+)
G474771 NA other downstream 76496 2500102 ~ 2510170 (+)
G474807 NA other downstream 171440 2595046 ~ 2598105 (+)
G474819 NA other downstream 252306 2675912 ~ 2676442 (+)

Expression


Co-expression Network