G475236


Basic Information

Item Value
gene id G475236
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000330
NCBI id null
chromosome length 4651236
location 3585475 ~ 3590497 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU545319
CCCCTCATGGACAACTGCCACATAAACGAAAACAAAACAACAACATAAAGTCCAGGCCTGGTCCTCTCTCATCCTTCACTGTCGCCACTCCTCTTCCGGGGCTCCTCCGTGAGACTCTCTCCGTTCCCACGGCTCTCGGCCCCGCCCTGTTTGCCACATATCCTCATCGCCCCTTACAGGCTGGGGGTACCCTCGAGACTGCGCTCTACTCCCATCCCCACCCTCCGGGGGGCTAGTCAAGGAGGCTGCAGCACCTGGGGGTAAGGACACACAAGGCGAGAGAAAAGGAGATGGAAGGATGAGGAGAGACAGAGATGAGAGAGGGGATAGAGGAAAAGAAAAAATTTTTTTGGTCCGTTTCCCAGACACACTGCCGCTCAGTCCTCAACCAGCCGAGAGGCCCTCACTCGCTGTACTGGACACTCTTCAATGGATGGCTCGATACTCCTCCGCCTCCTGGCGGACAATGAAGGCTCCTCCGGTTACGGGCACCCGGCAGCAAGCTCCCTGTTCCCTCGGTCTGCCTGCTCCTCCCCATCATGGCGGAAGGCAGCAGGTCTGGCCTCTGGCGAATGGCGGCAACTCCTTTGTCCCGTTACAGATGGCAGCCACCCCTCCTCGACCCAGGAGCATGGCACCACCTCCTTTAGCACCACCGCCTCAGCACCGTGATCCCCCTCAGCAGCGAGGGTTCTCTGACACCGTGTCCTTCCTTCCTCCCGGGTTTCGGCAGCAATGTAGCAATGTTTAAAGTTCAGGGAAGAAGGAGGCGGGAACTGGCAAACGCTCAACATAATTTTAATAATAAAATAAACAAACAACAAAACCAAAGCCCCTCACGGATGACTGCCGCATAAATGAAAACAAAACAACAACATAAAGTCCAGGCCTGGTCCTCTCTCGTCCTTCACTGTCGTCACTCGTCCTTTTATCTTCCCGGAGCTCCTCTGTGAGACTTGAAGCGGGTGAGGCCCATTAGCAGTCGCTGCTCTCAGCCCCACCCTGCTTGCCACTTATGCGCTTTGGCCGTTCATTTACACGACAATGGCATTTGGGGGCCTGAAAACGCAAACTTTTCGAAAAAAGAGCTACTTTTTAAAAACGATACCGCTATCATCTCTGTGTAAACTACAAAAATGCGAATTTATGAAAACTGTGACGTCACGTACATGCATATTATGTGTCCAGTCTATAGGTGCGTAGTGTTTCTTTACAAAGTGACATCGCCATCTACTGGCCTGACATGAATAATACAGGCCAGTCATTTTTGCGGATCCATGTGAATGGGGATAGTTTTGACAATCTTTGCGACAAATGCAAAGCAAAACTTTTCCGTTTTTAGTACATCTTTATCATGTAAACATACCCTAAGTAAAACATATCAGCTAATTAAAAAAAAAAAAGGTCATTTATATGGCCCCCAACTTCCTGTTTCAACAGGAAATAAATTGGCATAGGAATGAAATCTGCAATTGTCAAGTGAGTTCAATGCTAAAATTTTGATTGTTCAATAACCATGAATGTATCAACCCCCTTTCATCAAAACAGACCTCAAGGAGGTCATATTAGTTAGGTTAATTAGCAAAATCTGTGACTGGCTAAGTGTAAATTGATTTTATGTGGTGGATGCTTGCTGAGGCTAGCAGTAATCCACTCTGAAACAATGCTGCGGGGAAAGGCTTTGTCGTCTTCACACAATACAGCAGAAAAGAACTCATTGAAACAAACACACTTAAACTACGTCTGCTAGCTGCCAATGAGGAGCAGCTCTATTCATGAGGCATCAATCAGTGGGCTGGTGGGACATGTCTGATGGAGGAAGAGGAGGAAACTCTCATCTCCTTGTCTCCTTTGCCCTCTCTCCATTCAACCGCACAGTTTGACCCACACGCATTGATGACGGCATATGTAGAGGGCCTCTTGCCTACCCCTATTCAAACTCAACAGCGACACGTAATCTACATGTGCACTATGTACACTACGCTCATGTAACCTATATCACACAATGGCATGGCCTTAGGGCACATGTATGTAATGTACTCAAGGTAGACCTTTGAACATTGTTTCTTTAGTAAAAGAATTTTTCCATAATGGATCTCAACAGTGATTGGTGGTTGTTTCTTCAGGATTATGAGTAATGTAGTTTTTTTGCACAGAATTTGGCTAATACTTTTTTTTTTTTTTTTTTTTTTAAATTGGCATTGATTTGTGGCTTGTGGTTTTCCGCTTAACCAAATTGACACTTATGGTACAGTAGATCTTCAAAGGTTTATTTGTAATGGTTACAATCTATTGAATGAATGGGATTTTTTACTTTTGGTATCCTACTGTTGGATTCTATTGGGGCACAATCCATAATCACATTGTAGCAATCATTCCAGCCAACTTTGTCATGCGGGATAAACTATGGAAATTGACAGAACATCAATATTCCAACATCCACACCTCACAGCAGATGTCAATAGGGTGCATATATGAAGAGCCAAACAGGCCATGCCCTCTAGCAACTAATAAGAGGACAGATTAACAAAGCTCTCATTAAATGAGAACAAATCCTTATGAAACACAGAGAGGTCACAGGCTGGATGTGAAGTCAACTGCCAAACTGAAATACCAAAATCATTGTTAAAAACATTAAATGGTATTTTGAACACCATTTGATTTAAATCATTCAATACTGTCTTTATTTAATATTGTTTCAAAAACAAAACAACGAAGTGGATTGTTCTTATTGATTTATTCTCAAGGGATTTTCAGCTTGAAGGAAATGTTCTCAGGGCAGTCAAACTGACCACAATAAAAAACAAGGCTAAACACAAACAAAATGACCACTGGCTCTTTATAGAAACTTTAACTCCATAGGTCTGCATAGTAAACATCTATATTTTGAATTACATTATTTGAAGCCAGTGCAGTGGGCATTTCTGCTTTCAAACTTGTTTGTCAGGAAATCTTATGAAACCAAAATGAGAATTGCATCTGGCAGCGCATAAATGCCATCTTTCAGTGCTTGCGATTCTGTCTGTAGCTTGTTCTTTTGGTGCTCAACAATGACTCCAAAGGACTGTGATGTACAGTCTGTGTGAAATGGGGATGTAATTATAGCTAACATGAGATATATCAAGAACGCATTTTCCAATAAATAAGCAGATTCAGTACATTGGCTTAAATTACATCATTAGCTGACCTCACCCTTGTTGAGCAATGCATGCATTTATGGCATATTTTTATTGAGTGCAGGAGGTATAGGTATTATTGCATGTTCTCACATGCTGAGGTTGTAATGTATTTGTTATTATGGCCTTGAATGGAATTCATTAGTCACATCTGACACATGCTCTTTGCATTCAAAATTGGACTTTGGAAACATAAACAATTAAGCACTGTACACAAAACCACTGTTATAGCGTTGCACAACATAGTGAGGTAAAATCGCAGACAATAATGTGAATCATTTTAAACAAGAGCTCTGAGAGTTAGGGAAGAAGAAAAGATGATTGTAACACTTGTTTAGTTTGTTTTTGTTCAGAAAATGTATAGCCTAAAGCTATACTATACAAAGCCTTAAATATAGTGGCAATTAAAATTCTAACTAAAATTAGTTAGATACACATTGTGTCAGATAAACAATGTAATGGAAGTAGAAAACATATTTAAAATGGATTACTGAAAAGAAAAAATGTAGGGCGGGGACTTTGTTCAATTCACTGGTTGTTGATTGGATGGAGTCTGAATTCTCCACATGAAAGACAGACAACTGGCGAATCAATATGCTACTTGTTTTCTCACCAAAACAGTAAAAGTTTAAGTAGATTAAACTTAATTAAAATTTGGAGTGTGTATTATGAGAATAACTGACATTATGATTAACAGATTGCACATAACTATGCAACAGAACGCAATTTTGCGATGTGTTAGTATGTCCCAAAGCTTGCCTACTCTTCTGCTATACTTTTTTTCTTCACAAAAAGAGTAGATACTTTTATGCCGTAGTATATAGGCGTCGTGGGATGCAGCATCTGGACCAACGGATTCAATGTGTTTCCATCCAAAGTTGCGAATTTAACTTGCGCAAATTAGAAAATTGCATAAAACATTTGCGAATAAAGCACCATTTCCATCCAACGAGATGAAGACAACAAAATCGTCACTTCCTGATAAACAGGCGTCAAATATCACTAAGAAAAATGTAGTACGAGAACTGTGGGTCTTTTTTCGTATATAAATTACTTGTGTGCCAGAGTGCACAGACAAAACGCAAAAAGCACGGTCATGTTATCTTGCTTTCGGAGGATGGGAACTAGGCCTATTAAAAAAAATAGACTCAAAAAAACAGTTTGTTCATGAATCAGTCATCACTACTTCTCTCACAAACACCAATGGTTTCAACAACTTTTATGATAGTTTTATGATGTATTTTTTGATATTTTGCAAGAAAAAAAATCATCAGAAGAAAAATAAAGTCACGTTTGGAACAAGTGGAAGAGTAAATGATTTTCATTTTGTGGTGAACTATCACTTTAATTTCAGAGGCATTTTTAAAATTATTCATCTATTTAAATAGATTTTTAATTGCACCATCCATGAATATTTAAGTTCAAATAGTGCCATAATAGCTACAAAAGGATGTATTCTACCCCTCAGAGCGAAAACAAAACCCTCCCCCGTTGAGTGCAAATTCTTTGTATGGTTGTTTTGATCGGAGTGCAGCGAGTCAACGGGTTCAAAAGTGGGCGCGGCTCAGGGGCTGCGTAGCGTTCAACTCTCTTTCCCCAAACCCAGTATTCTGCTCTCTCACACGACAAAATGTGTCATGCCTGCGTAAATATCATTTCTCGCAGCCTTACCAAAAGCTGCAGCGCACCAGAAATATTGTTCACTGTTTGTCCTCAAGTGACCCGCTGCAGAAGTGAGTACATCCCGTTCCTGTGATATTAATAGCTCCTTTGCGTCACCAAATTGTGCTAGACTGCTCTGCTAGACACGCGATGCTAGCCAAACGCGCAGCAACGCATTCACACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU545319 True 5023 TUCP 0.41 1 3585475 3590497

Neighbor

gene id symbol gene type direction distance location
CI01000330_03505183_03536773 OTUD7A coding upstream 48416 3503305 ~ 3537059 (+)
CI01000330_03495676_03498512 NA coding upstream 86961 3494906 ~ 3499215 (+)
CI01000330_03316303_03332582 BNIP2 coding upstream 252893 3315549 ~ 3332582 (+)
CI01000330_03273418_03280036 NA coding upstream 305254 3273322 ~ 3280221 (+)
CI01000330_03172826_03180813 ANX2A, ANXA2, ANXA2A coding upstream 404529 3172826 ~ 3180946 (+)
CI01000330_03620261_03633818 TRPM1B, TRPM1, TRPM1A coding downstream 29764 3620261 ~ 3635348 (+)
CI01000330_03670667_03672729 NA coding downstream 79970 3670467 ~ 3673129 (+)
CI01000330_03692275_03699509 ACSBG1 coding downstream 101488 3691985 ~ 3699529 (+)
CI01000330_03723197_03728117 NA coding downstream 132632 3722943 ~ 3728211 (+)
CI01000330_03771375_03773835 ATP5O coding downstream 179889 3770386 ~ 3773940 (+)
G475230 NA non-coding upstream 39944 3538541 ~ 3545531 (+)
G475374 NA non-coding upstream 140122 3444918 ~ 3445353 (+)
G475217 NA non-coding upstream 163138 3394037 ~ 3422337 (+)
G475248 NA non-coding upstream 221291 3339892 ~ 3364184 (+)
G475402 NA non-coding downstream 16496 3606993 ~ 3607198 (+)
G475404 NA non-coding downstream 22741 3613238 ~ 3613456 (+)
G475197 NA non-coding downstream 58353 3648850 ~ 3651319 (+)
G475212 NA non-coding downstream 63805 3654302 ~ 3657485 (+)
G475415 NA non-coding downstream 91161 3681658 ~ 3681908 (+)
G475235 NA other upstream 494242 3072547 ~ 3091233 (+)
G474819 NA other upstream 909033 2675912 ~ 2676442 (+)
G474807 NA other upstream 987370 2595046 ~ 2598105 (+)
CI01000330_02590806_02597446 NA other upstream 988328 2590091 ~ 2597586 (+)
G474777 NA other upstream 1070711 2511456 ~ 2514764 (+)
G475421 NA other downstream 126047 3716544 ~ 3717419 (+)
G475483 NA other downstream 402529 3993026 ~ 3993938 (+)

Expression


Co-expression Network