G475421


Basic Information

Item Value
gene id G475421
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000330
NCBI id null
chromosome length 4651236
location 3716544 ~ 3717419 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU545514
AGTTCTCATTCTGCTTGATCTATCTGCTGCCTTTGACACGGTGAATCATCAGATCCTTCTGTCCACCCTCTCATCACTTGGCATCACAGATGATCCCACAGTAGCTGCACGAATCTCAAGCTGTCTGGCGGACATCTCGGCATGGATGAAGGAACATCATCTACAGCTCAACCTGGCAAAGACTGAGCTTCTCGTCTTCCCTGCCAATCCGACTCTAAATCATGATTTCAGCATCCAGCTAGGCACATCTTCTATTACCCCATCAAATTTGGCCAGAAATCTTGGAGTAATCCTTGATTACCAACTGACCTTCAAAGACCACATTGCAAAGACCACTCGGTCATGCAGATTTGCACTATACAACATCAGGAAAATCAGGCCCTTTCTAACAGAACATGCAACACAACTTCTGGTCCAGGCCCTGGTCATTTCCAGGCTTGATTACTGCAATGCTCTTCTGGCTGGACTGCCATCATGCACAGTCAGGCCTCTACAAATGATTCAGAACGCTGCAGCACGTCTCGTCTTCAACGAGCCCAAAAGAGCCCATGTCACGCCTCTCTTCATCTCTCTTCACTGGCTACCAATTGCTGCTCGCATCAAATTCAAGGCGTTGACGCTTGCTTACAGATCTGCCACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU545514 True 642 TUCP 0.48 2 3716544 3717419

Neighbor

gene id symbol gene type direction distance location
CI01000330_03692275_03699509 ACSBG1 coding upstream 17015 3691985 ~ 3699529 (+)
CI01000330_03670667_03672729 NA coding upstream 43415 3670467 ~ 3673129 (+)
CI01000330_03620261_03633818 TRPM1B, TRPM1, TRPM1A coding upstream 81196 3620261 ~ 3635348 (+)
CI01000330_03505183_03536773 OTUD7A coding upstream 179485 3503305 ~ 3537059 (+)
CI01000330_03495676_03498512 NA coding upstream 218030 3494906 ~ 3499215 (+)
CI01000330_03723197_03728117 NA coding downstream 5710 3722943 ~ 3728211 (+)
CI01000330_03771375_03773835 ATP5O coding downstream 52967 3770386 ~ 3773940 (+)
CI01000330_03779829_03785869 CIB2 coding downstream 62410 3779829 ~ 3786867 (+)
CI01000330_03814548_03834503 TBC1D2B coding downstream 96876 3814295 ~ 3834607 (+)
CI01000330_03852880_03865462 DAPK2 coding downstream 135461 3852880 ~ 3865853 (+)
G475232 NA non-coding upstream 12249 3703324 ~ 3704295 (+)
G475237 NA non-coding upstream 28607 3685096 ~ 3687937 (+)
G475415 NA non-coding upstream 34636 3681658 ~ 3681908 (+)
G475212 NA non-coding upstream 59059 3654302 ~ 3657485 (+)
G475197 NA non-coding upstream 65225 3648850 ~ 3651319 (+)
G475233 NA non-coding downstream 27592 3745011 ~ 3754518 (+)
G475462 NA non-coding downstream 91362 3808781 ~ 3808995 (+)
G475464 NA non-coding downstream 212024 3929443 ~ 3929668 (+)
G475236 NA other upstream 126047 3585475 ~ 3590497 (+)
G475235 NA other upstream 625311 3072547 ~ 3091233 (+)
G474819 NA other upstream 1040102 2675912 ~ 2676442 (+)
G474807 NA other upstream 1118439 2595046 ~ 2598105 (+)
CI01000330_02590806_02597446 NA other upstream 1119397 2590091 ~ 2597586 (+)
G475483 NA other downstream 275607 3993026 ~ 3993938 (+)

Expression


Co-expression Network