G476045


Basic Information

Item Value
gene id G476045
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000330
NCBI id null
chromosome length 4651236
location 4107557 ~ 4107797 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU546228
GAATCTTTTCGGTTCGGAGCGCGTATCAAACTTCCGCGTCACGTGATTTTAGTAAACGAAGCTTCAATACGTCATAAGTGTTTCGAAATTTCAATGGTTCACTACTGGGGTGTGACTTTGGCAGTTTGATACACGCTCCGAACCACTGATTCGAAACAAAAGATTTGTAAAGCTTCATGAAGCAGTGTTTTGAAATCGCCCATCACTAGATAGTTGAATAAAGTCATTATTTTGTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU546228 True 241 lncRNA 0.39 1 4107557 4107797

Neighbor

gene id symbol gene type direction distance location
CI01000330_04098886_04101731 NA coding upstream 5751 4098098 ~ 4101806 (+)
CI01000330_04061721_04074563 NA coding upstream 32936 4061721 ~ 4074621 (+)
CI01000330_04025928_04040081 MAN2C1 coding upstream 67316 4025717 ~ 4040241 (+)
CI01000330_04011467_04016798 CA12 coding upstream 90200 4011467 ~ 4017357 (+)
CI01000330_03852880_03865462 DAPK2 coding upstream 241704 3852880 ~ 3865853 (+)
CI01000330_04109116_04119729 ZNF800A coding downstream 1319 4109116 ~ 4120304 (+)
CI01000330_04126471_04281733 GRM8A, GRM6, GRM8, GRM8B coding downstream 18674 4126471 ~ 4281733 (+)
CI01000330_04356072_04383072 POT1 coding downstream 247867 4355664 ~ 4383193 (+)
CI01000330_04384117_04388414 GPR37A coding downstream 276118 4383915 ~ 4388465 (+)
CI01000330_04491976_04518040 WASL, WASLA coding downstream 384179 4491976 ~ 4518040 (+)
G475482 NA non-coding upstream 115945 3986610 ~ 3991612 (+)
G475470 NA non-coding upstream 173031 3934266 ~ 3934526 (+)
G475464 NA non-coding upstream 177889 3929443 ~ 3929668 (+)
CI01000330_03814548_03834503 TBC1D2B non-coding upstream 273039 3814295 ~ 3834607 (+)
G475462 NA non-coding upstream 298562 3808781 ~ 3808995 (+)
G476108 NA non-coding downstream 200699 4308496 ~ 4308805 (+)
G476113 NA non-coding downstream 211743 4319540 ~ 4319822 (+)
G476115 NA non-coding downstream 212954 4320751 ~ 4324343 (+)
G476123 NA non-coding downstream 223890 4331687 ~ 4331957 (+)
G476129 NA non-coding downstream 267315 4375112 ~ 4439836 (+)
G475483 NA other upstream 113619 3993026 ~ 3993938 (+)
G475421 NA other upstream 390138 3716544 ~ 3717419 (+)
G475236 NA other upstream 517060 3585475 ~ 3590497 (+)
G475235 NA other upstream 1016324 3072547 ~ 3091233 (+)
G474819 NA other upstream 1431115 2675912 ~ 2676442 (+)

Expression


Co-expression Network