G476108


Basic Information

Item Value
gene id G476108
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000330
NCBI id null
chromosome length 4651236
location 4308496 ~ 4308805 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU546319
CATTTTCAGTGCAGTTCCAAAGGGCTTTACGCTGTATGTCCTACGCTTTCCTTATTCAACTTACGTAACGAACGTAGCGCCAGTTCTGTTTTTTCCGTAAGTTGAATAGGGAAGGCATAGGACATTTAGCGTGAGCTTTTTGAAGAATACGGAATCGCGTTCTGGTGGAAGCACTTGTGATGCGATCATTTGTGCCTATAAAGCATATACATTTTGATTTTTTTTTAGAAAATGACCGATCGTTTCACTAGATAAGACCCTTATTCCTTGTCTGGTATCGTTTAAAGCCCTTTGGAGCTGCACTGAAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU546319 True 310 lncRNA 0.41 1 4308496 4308805

Neighbor

gene id symbol gene type direction distance location
CI01000330_04126471_04281733 GRM8A, GRM6, GRM8, GRM8B coding upstream 26763 4126471 ~ 4281733 (+)
CI01000330_04109116_04119729 ZNF800A coding upstream 188192 4109116 ~ 4120304 (+)
CI01000330_04098886_04101731 NA coding upstream 206690 4098098 ~ 4101806 (+)
CI01000330_04061721_04074563 NA coding upstream 233875 4061721 ~ 4074621 (+)
CI01000330_04025928_04040081 MAN2C1 coding upstream 268255 4025717 ~ 4040241 (+)
CI01000330_04356072_04383072 POT1 coding downstream 46859 4355664 ~ 4383193 (+)
CI01000330_04384117_04388414 GPR37A coding downstream 75110 4383915 ~ 4388465 (+)
CI01000330_04491976_04518040 WASL, WASLA coding downstream 183171 4491976 ~ 4518040 (+)
CI01000330_04549486_04558357 IQUB coding downstream 240681 4549486 ~ 4559100 (+)
CI01000330_04561065_04566268 SLC13A1 coding downstream 252041 4560846 ~ 4566515 (+)
G476045 NA non-coding upstream 200699 4107557 ~ 4107797 (+)
G475482 NA non-coding upstream 316884 3986610 ~ 3991612 (+)
G475470 NA non-coding upstream 373970 3934266 ~ 3934526 (+)
G475464 NA non-coding upstream 378828 3929443 ~ 3929668 (+)
CI01000330_03814548_03834503 TBC1D2B non-coding upstream 473978 3814295 ~ 3834607 (+)
G476113 NA non-coding downstream 10735 4319540 ~ 4319822 (+)
G476115 NA non-coding downstream 11946 4320751 ~ 4324343 (+)
G476123 NA non-coding downstream 22882 4331687 ~ 4331957 (+)
G476129 NA non-coding downstream 66307 4375112 ~ 4439836 (+)
G475483 NA other upstream 314558 3993026 ~ 3993938 (+)
G475421 NA other upstream 591077 3716544 ~ 3717419 (+)
G475236 NA other upstream 717999 3585475 ~ 3590497 (+)
G475235 NA other upstream 1217263 3072547 ~ 3091233 (+)
G474819 NA other upstream 1632054 2675912 ~ 2676442 (+)

Expression


Co-expression Network