CI01000335_00077557_00081374 (CD5L)


Basic Information

Item Value
gene id CI01000335_00077557_00081374
gene name CD5L
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 75813 ~ 81486 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000335_00077557_00081374.mRNA
GTATATAAGAAGGCCAATTTTCTTGTATGTTCAGTCTCGATCTGACATCCTCTCAGTTGTGACTCAGTTTTTGCTCTTTGCATTTTATACCAACGAGATCTCATCTAAATTTGCTTTTCATAGGCAAGAGCATTTTTCTCAGACTTATAGATTTTATACTTAGATTTTTGATTAACATTATATTCAGATTGGGTTAACATAATACTAAACTTTTGATTAAGATTTTTACTAACATTTTTCTTTGATAATACTTTTTGGACTTCAATATTTCAGAGATATTGGAAGTTGATTTATAACTGTTTGTATTATTCTGTTATACAAATTTTTATCATCCAAAATCAATATGTCTCTCATTTACTTTCTGATTATACTTCGTTTAGCAATAAAATCGATTTAATCATCTGACCTTGGATCTCCTCATGCATCAATAATGTATCACACAAATGCAGTGTTTACAGTCAAATGTACTGGCTACACTTTATTTTAAGGTGCCCTTGTTACAGTGTAATTATACATTTAAGTACTGAGTAATATTAATTAACAACATGTACTTAATATAGGGTAGGGTTTAGGGTTAGTTGCATAATTTGCTGTTATTACCATAGTAAGCACATGTAACAAAGACACTGTAAATTAAAGTTGTAAAATTAATCATTTAAAATGACTCTAAAACATCCCAAGTGGGGACTGTCAGTGTAAATGTAAGACAAAAAATATTATTAAAATAATATTTGAAACATAGCCCATTAGATAAATGCAAAAGTACATAAAAAAAAAAAAACAACACACTGATGATATATATGCGTATGCTAATGATTTTATGGTAATACCTGGTTAGACGGTCGTCTGCTTGAAAAGTGAGACGTGTGACAGTTATACCGACTGCTTTCCTCTTGTTCACAGCCACTCTACAGCCTGAACACCTGCTGGTTCTGCCATCCAAATGGATTCATATCAATGGGAATTTACACCTACGTGTGCATTTTTTTGCCCACCCATAAAAATAACAGTGGGATCCACATTTGATAAACAAAACATCTAGAAATTCACACAATACCTGTGCATAATCAAATTATTATTTAAACCTGAAGAATATGCAAACTGCCCAGTCTAAGAAAAACTCTGTATGATGTATTTGTTTATAGGGACATAACATGAACTTTGTAAGTTATAGACTCTCTGACACTTGCTTTGTGAATGTGTTTTTAACCAAGCATATATAGAGTATTTAGTAAAGGAACTGTTTTTATTGCATCTGATGGGTAAACATATTCCATTTCAATACTTCATCTTGTACATGTGAACTTTGCTCGTATGATGGGTTGACCAGGGTGTCCATGAAAATACAAACAAATCTAGAGTTCTAGTATTCGTGAATTTTGACATTTTGTTTCCATATGCTTTGCATGTCTTTTTAAAGGAATTTACATGAAACTGGCCCACCAACAGAAAAACAAAACAATATAAAAAAAAATATAAAGGATGTTCCTTGAAACTGGCCCACCAAAATGATATCATCAAGATATTTGAATACTGACTCCTCTACACATCTTTTACAAAGCAGAGCATTCCCGTAATTCCCAAATAATTGTGTGGATTGATTTGCATTGAAATCAAATCGTGGCATGAAAACACATGTAGAATGTTATTCTTAGACCAAACAGTGTTTCTGCAATGTATTGCCAATGAGAAATTCACTCTTGGTTTCATGACTAATTGAGCATTTAATAGGATTACACTCTCAATGACTCTGAATATGTTGCACAGTAAGAGTTTTCTCTCTGATGTTGTCTTGGAAAGGCATCTGAAGGGAGGAGCCAGGAAGGAGGTGATTCCACATACAAATAAATCACCTGGAAACCTCCTTAACATAATCCCACACCATCACGGAGACGAAGGCGCTTATCAAAGGACTGACACATTAACAGATTTCGGAAATGGACCTCCAGTCGAAGCTCTTTTGAGGTTGATGAATGGTGTTGGCTTTTGTTCTGGACGAGTGGAGGTTCTCTATAATGGAATATGGGGAACAGTGTGTGATGATGGCTGGGATCTGTCAGATGCTGCAGTGCCCTTGTCAATGTTTTGCTTCACAGAAACTGTGAGACGAGTTGTGGTGAGGATTGTGGTGAAGGCCAAGACTGGAGTCAATGTCAATGACCCAGATATCAAGAAGAATCTTTTGGACATGTGTCAGGAAGAGAGAAAGACCAAAGTGAAATAAAGTAGAAGATTTTTTAATTATTTACAAGAATTGTATTTCAAAAAAAGAAGAAAAAAAAGTAAGTTCTGTGACACTTGATTAATCGGCTTTAAATTTATGTAACACCATATAA

Function

symbol description
cd5l Predicted to enable serine-type endopeptidase activity. Predicted to be involved in zymogen activation. Predicted to act upstream of or within positive regulation of complement-dependent cytotoxicity and regulation of complement activation. Located in cell surface.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000335_00077557_00081374.mRNA False 2336 mRNA 0.34 4 75813 81486

Neighbor

gene id symbol gene type direction distance location
CI01000335_00103583_00132304 NA coding downstream 21986 103472 ~ 132429 (+)
CI01000335_00149953_00163006 TFEC coding downstream 68467 149953 ~ 163539 (+)
CI01000335_00193513_00197704 NA coding downstream 110387 191873 ~ 197764 (+)
CI01000335_00286459_00296460 NA coding downstream 203241 284727 ~ 297256 (+)
CI01000335_00489106_00492720 NA coding downstream 407202 488688 ~ 492973 (+)
G477288 NA non-coding upstream 49086 26180 ~ 26727 (+)
G477276 NA non-coding upstream 56181 18228 ~ 19632 (+)
G477346 NA non-coding downstream 92916 174402 ~ 174618 (+)
G477347 NA non-coding downstream 93752 175238 ~ 175473 (+)
G477348 NA non-coding downstream 94735 176221 ~ 176458 (+)
G477407 NA non-coding downstream 102978 184464 ~ 184694 (+)
G477409 NA non-coding downstream 107696 189182 ~ 189439 (+)
G477502 NA other downstream 468036 549522 ~ 554633 (+)

Expression


Co-expression Network