CI01000335_00103583_00132304


Basic Information

Item Value
gene id CI01000335_00103583_00132304
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 103472 ~ 132429 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000335_00103583_00132304.mRNA
ACATAAAAAGCATTTAAGAGTGTCACAGTATGCATTAAGCAATCCACATATGTCCTGTGTTTCCTTTAATTATAAAACACTCAATTTATCATTTGTCTAGTTTTAAACACGATGGTGTCAAACCCTATAAAAGACAGCTGTGGAAAATGTTTGTCTCAGTGCAATGACTTATCTTGCATTATTGGAAGACTTGGCAAACAGTGCGCTCCGCAGAGCGTTTTCCAAGATCGTGCTGATCTGCTTGCTCGCGGTGAATCTGCTCATCTCTCACCTGCGTTCAACACCTGCCGCTCCTCCGGACACTTCTTCACATTAAGAGGGATTAAGATCTTCTATAAAGCTGGACTTCTGCTTTCCAGCCTGTCTTCTCTGATCTCCAGTCATCCGAGAGGCTTCTGCCAGCCTGCGAGCTGTCAAAGTAGCCCTGGAATCAAACGCCACTCCATGCTCAGCTATGATCAAAGGAACACAGCGTGCAGCCTTAGGAATCCAGCAATGTTTCAGTCATTCTCTGGTGTTCAAGCAGCCCCTGCGACTAATGTAGCAAACCTGCAGAACCAGTGGGCCCCGGGGCCCTCGTTCTCCTCCTGCTCCTACCCCTACCACACCAACCCGAACCCAGGTCCCTACCACAGCAAACAGCCCTCAACCTGGCCTTGGAACCGATGGAAGGCAGGAGAACTAGACTCTTCTTGTCTTCAAAGATATTATCTGCCTGTCCCAACTGACCTCTGGCCTCTGATCAGTGTGAGTCCATTTCTGCGTTTGATGGGGAGACATGTATCAAACAGGGCCACTGTGGCCCTTAATGTGGTGTATCACCATGGGCCCTCACAAAACCCTCAGGCCGACATCTCAGAATCACCGCTCAGCCACACTGATTAGTCGCTGGCGTCTTTTGGACAAAATGACTGAAAAGGACACAGGAGTTCCTCTCCAGTCAGGGTGCATGAGTCCCTCATGAGGGACTGGACTAGACTAGACTAATCTATACTAAACTAAAATAAACA

Function

NR:

description
hypothetical protein cypCar_00018047

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000335_00103583_00132304.mRNA True 1010 mRNA 0.48 5 103472 132429

Neighbor

gene id symbol gene type direction distance location
CI01000335_00077557_00081374 CD5L coding upstream 21986 75813 ~ 81486 (+)
CI01000335_00149953_00163006 TFEC coding downstream 17524 149953 ~ 163539 (+)
CI01000335_00193513_00197704 NA coding downstream 59444 191873 ~ 197764 (+)
CI01000335_00286459_00296460 NA coding downstream 152298 284727 ~ 297256 (+)
CI01000335_00489106_00492720 NA coding downstream 356259 488688 ~ 492973 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding downstream 394522 526951 ~ 537487 (+)
G477288 NA non-coding upstream 76745 26180 ~ 26727 (+)
G477276 NA non-coding upstream 83840 18228 ~ 19632 (+)
G477346 NA non-coding downstream 41973 174402 ~ 174618 (+)
G477347 NA non-coding downstream 42809 175238 ~ 175473 (+)
G477348 NA non-coding downstream 43792 176221 ~ 176458 (+)
G477407 NA non-coding downstream 52035 184464 ~ 184694 (+)
G477409 NA non-coding downstream 56753 189182 ~ 189439 (+)
G477502 NA other downstream 417093 549522 ~ 554633 (+)

Expression


Co-expression Network