CI01000335_00526951_00528066 (GPR85.L, GPR85)


Basic Information

Item Value
gene id CI01000335_00526951_00528066
gene name GPR85.L, GPR85
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 526951 ~ 537487 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000335_00526951_00528066.mRNA
ATGGCGAACTACAGCCATGCAGGGGACCACAACATCTTGCAGAATGTCTCTCCGCTCGCCACTTTCCTTAAACTGACCTCCCTGGGTTTCATCATCGGCGTCGGCGTGGTCGGAAACCTCCTGATCTCCATCCTGCTGGTCAAAGACAAGAGCCTTCATCGAGCGCCCTACTATTTCCTGCTGGACCTCTGCGCTTCGGACATCCTCCGCTCGGCCATCTGCTTCCCCTTCGTGTTCACCTCCGTCAAGAATGGCTCAGCCTGGACGTACGGCACGCTGACTTGCAAAGTGATCGCCTTTTTGGGCGTGCTCTCCTGTTTCCACACTGCCTTCATGCTGTTCTGCGTTAGCGTGACGCGGTACCTGGCCATCGCCCACCACCGCTTTTACACTAAGCGGCTGACCTTCTGGACATGCCTGGCCGTCATATGCATGGTGTGGACCCTGTCGGTAGCCATGGCGTTCCCTCCGGTGCTGGACGTGGGCACGTACTCCTTCATCCGCGAGGAGGACCAGTGCACCTTCCAGCACCGCTCCTTCCGTGCCAATGACTCGTTGGGCTTCATGCTGCTCCTTGCACTCATCCTCCTGGCCACCCAGCTTGTCTACCTCAAGCTCATCTTTTTCGTCCACGACCGCCGAAAGATGAAGCCGGTCCAGTTCGTGCCAGCCGTCAGCCAGAACTGGACCTTCCATGGCCCGGGGGCGAGTGGCCAGGCCGCGGCCAACTGGCTGGCCGGCTTCGGCCGGGGCCCCACGCCTCCGACCCTGCTGGGAATCCGGCAGAACAGCAATGCGGCGGGCCGCAGGCGTCTGCTGGTGCTGGATGAGTTTAAGACTGAAAAGCGGATAAGCAGGATGTTCTACATCATTACCTTCTTCTTCCTGAGCCTGTGGGGACCCTACCTGGTAGCCTGCTACTGGAGGGTGTTCGCCCGAGGCCCAGTGATCCCGGGAGGCTACCTGACAGCGGCCGTGTGGATGAGCTTCGCCCAAGCGGGTGTCAACCCCTTCATCTGCATCTTCTCCAACCGGGAGCTCCGGCGATGCTTCAGCACCACGCTCCTCTACTGCAGAAAATCCAGGTTACCGAGGGAACCCTACTGTGTTATATGAAGGTTCAGTGGCATTTTTCGTTTTTCCAATGTGGTTTATGTTTGGATGCCCTGGTTGATCAGGGATGTGTTCAATTGTACAGCTCTCTCCTCCTCCTCCTTCTCCTCTTCCTCTCGCTCCCTTTTCGAGGCCTGTAGTTGAACCGTCTGAATGGAATAAGATGATGAACGGACAGAGGACACGTCTCACGTTTATGTTCTAGTAAACAACCAATGCGAAAGGCCATTTGAAACCCAATACGCAAAAAAAAGAAAAAAAAAGAAAAAAGAAAAAGTGAAAAAAAAAATTGAAAAAAATTGAAAAATAAATTGAAAGAAAAGAAAAAATGGATACATCAAGAAGGGACTGACCTTTGCTTTGGATATCTACAAGACTCTGGAAAGGGTGTAAAAGAAATCAAACTGTTAAGGAATCACTGGAATTTGTGTCTAAAAAGTTGCACTAACGAGAAGACCCGAAGATGCTTTTTTCGCTCAGTTGCATTGCAAGGATGTCTTGTTTTTCCCAAACTGAAAATACGAATGCTTTAATCTGCAACAGACTTCTCTTTCACTGTAAGTAAACAAAACATGTGGGGTGACTAACTCTGTTGGAATACACCTTCACGAGAGGATAAATTGGTTTAAATGTAAGTGATATCTTTTTTCCTTTTAGGGTTGGGTTGGGGCGGGCTGGTGGGCGGGTCTTAAGGGGGCGGGTCCTGTCGTGTGGTTTTCGAATTGCAACTTAAATTATTTCCTGTAGTTTTATGATCCATATGGTATGTCTCTGTTGTCTGGCAATGTTATTTTCTTATCTCATTTTTCTAAGTCTAAAAACAAATGTTTGAATTTTAAAACGTTGCTCTTGAGAACCTTGTACTTAAACTGACAGTGGAGAACCAGTTAAGCTAAGTTCAGTGTGGCATTTCCATGTACCCGAACACGCAAATTTTGTTACAGATACCACTCCAGCTGTTCTTGCCTTAATGGTTCTGGTGTTTTGTTCATGTTTTCATTTGCAAGGTGAGGGTTGTTTTCTAAATCGGTTCCTCTAAAATGTCTCCTCGAGGCATATTGGGAGGCTTTTCACATCAGGGTGAAGTGCATATTGATTTGAAAAACACTATTCACCACCATCACAGGCACAGACCGTGCACCGACAGCCCATTTCTTACCCTGTAACGTTTGCTACACCCCACCGAGTGCGCAGAGCACAGGGAGCATGTGTGCGTGGACGTCTGTGCGTGAGTGTGCGCGTGTGTGCGTGCGTGCGTGCTAGGCGAACAGCTGTCATGTCAAGACCAGAGCCTTAGTCTGAAATCTTGCACAATTTGTAAAAAATGTAATAGGAAAAACAAAAAACATTGTATTTAAGGCACAGAGTCTTGTTTCTACTTTCCCAACATTTGCTCTCTACTAATTGTTTTGATTAACTTACTTTTCTCTTGTGGCCATTTTAATATTTATTCTGTATTCTTTTTGTATATTATAGGTAGATAGTGTGTAAGTTTGTGAGTCTTTCATTTTGAAGTCCCGAATGTGAGTACTGTTTAAGTTAGGACTGCAATTGCTGAAAGTTAACTGTGTAATCTGTTGCTTACATTTTTGAAA

Function

symbol description
gpr85 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in central nervous system and retina. Orthologous to human GPR85 (G protein-coupled receptor 85).

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04302 SREB2, GPR85; super conserved receptor expressed in brain 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000335_00526951_00528066.mRNA False 2708 mRNA 0.48 1 526951 529658

Neighbor

gene id symbol gene type direction distance location
CI01000335_00489106_00492720 NA coding upstream 33978 488688 ~ 492973 (+)
CI01000335_00286459_00296460 NA coding upstream 229695 284727 ~ 297256 (+)
CI01000335_00193513_00197704 NA coding upstream 329187 191873 ~ 197764 (+)
CI01000335_00149953_00163006 TFEC coding upstream 363412 149953 ~ 163539 (+)
CI01000335_00103583_00132304 NA coding upstream 394522 103472 ~ 132429 (+)
CI01000335_00586957_00597421 TMEM168A coding downstream 57299 586957 ~ 598108 (+)
CI01000335_00681430_00741137 DOCK4B, DOCK4 coding downstream 151772 681430 ~ 741222 (+)
CI01000335_00884515_00888701 NA coding downstream 354680 884338 ~ 888831 (+)
CI01000335_00930276_00934328 NA coding downstream 400618 930276 ~ 936380 (+)
CI01000335_00988268_00990978 NA coding downstream 458610 988268 ~ 991337 (+)
G477489 NA non-coding upstream 55 523714 ~ 526896 (+)
G477523 NA non-coding upstream 120670 405053 ~ 406281 (+)
G477441 NA non-coding upstream 133825 327884 ~ 393126 (+)
G477458 NA non-coding upstream 200871 325859 ~ 326080 (+)
G477457 NA non-coding upstream 201512 325125 ~ 325439 (+)
G477505 NA non-coding downstream 25590 555248 ~ 612384 (+)
G477588 NA non-coding downstream 92306 621964 ~ 622163 (+)
G477589 NA non-coding downstream 93082 622740 ~ 623214 (+)
G477497 NA non-coding downstream 95140 624798 ~ 627290 (+)
G477605 NA non-coding downstream 187440 717098 ~ 803072 (+)
G477502 NA other downstream 19864 549522 ~ 554633 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_027074 gpr85 coding NC_007115.7 CM002888.2 6643421 ~ 6647605 (+)
eurasian perch (Perca fluviatilis) G62878 NA non-coding NC_053117.1 CM020914.1 19096786 ~ 19097132 (-)
bowfin (Amia calva) AMCG00006558 gpr85,LOC106576049 coding CM030134.1 CM030134.1 8727643 ~ 8728326 (+)
mexican tetra (Astyanax mexicanus) G62455 gpr85,LOC106576049,LOC107580073 unknown NC_035903.1 CM008306.1 6851230 ~ 6855762 (+)