XLOC_013411 (BX548157.1)


Basic Information

Item Value
gene id XLOC_013411
gene name BX548157.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 21712296 ~ 21720051 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026485
aactgctctgctccagtaggagacccACAACCCTCTGATGAGgttTGCTGAAGTATGACCGTATGACAGAAGGAGAGAacagctctgctccagtacgagacccacaactctgatgaggtcttatattgaaggatgaccatatgacagaggaagagaactgctctgctccagtacgagactcacaactctctgatgagcttttattgaaggatgaccatatgacagaggaagagaactgctctgctccagtaggagacccacaactctgatgaggtagaaagTTACAGTGGATCGTGATTTTGGAGGAGGTGAAGTCCAGTCTAaaagAGTCCCCTCAAGTATCATCACCATGGTACAGTGTCTGTGAAGATAGTGAAGCAGACCCAGCATTCACAAAAAAGAGAGGTCCCATAAAGAGAAGATCCTggagcaaacaggaagtacatGCTGTGGTGAAAGCTGAACCATTGGCTCTAAAAACCAGAGATTGGTCAGCTttggatttttatattaaaaactgaatctcggctatttagataaaaaatctgaataacaCTTTTATAGTAAGTATACACTATACATCATTAGTTTAGcactaactctacattaatagactttaggaagcagtttataaatacagcttcaaacgctgtattcttgacttgacttaattgtattttcatgctttgt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094529

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026485 True 690 processed_transcript 0.41 7 21712296 21720051

Neighbor

gene id symbol gene type direction distance location
XLOC_013409 mbtps1 coding downstream 27241 21645309 ~ 21685055 (-)
XLOC_013408 slc38a8a coding downstream 71907 21622414 ~ 21640389 (-)
XLOC_013407 pnp6 coding downstream 440923 21257261 ~ 21271373 (-)
XLOC_013406 calb2a coding downstream 493445 21198762 ~ 21218851 (-)
XLOC_013405 got2a coding downstream 523528 21178721 ~ 21188768 (-)
XLOC_013412 pskh1 coding upstream 8143 21728194 ~ 21748966 (-)
XLOC_013413 nrn1la coding upstream 62023 21782074 ~ 21910991 (-)
XLOC_013414 nutf2 coding upstream 193634 21913685 ~ 21929451 (-)
XLOC_013415 tsnaxip1 coding upstream 211690 21931741 ~ 21950751 (-)
XLOC_013416 pard6a coding upstream 308623 22028674 ~ 22094102 (-)
XLOC_013384 BX323829.1 misc downstream 2170065 19542102 ~ 19542231 (-)
XLOC_013398 BX470160.1 non-coding downstream 865983 20846190 ~ 20846313 (-)
XLOC_013395 BX470130.1 non-coding downstream 1078373 20633789 ~ 20633923 (-)
XLOC_013388 NA non-coding downstream 1392423 20285665 ~ 20319873 (-)
XLOC_013387 NA non-coding downstream 1563199 20140072 ~ 20149097 (-)
XLOC_013386 NA non-coding downstream 1828002 19883591 ~ 19884294 (-)
XLOC_013417 CT573204.2 non-coding upstream 363721 22083772 ~ 22083886 (-)
XLOC_013420 CR933017.1 non-coding upstream 830544 22550595 ~ 22552314 (-)
XLOC_013426 BX088710.1 non-coding upstream 1019681 22739732 ~ 22753637 (-)
XLOC_013427 BX663522.1 non-coding upstream 1139428 22859479 ~ 22862467 (-)
XLOC_013428 NA non-coding upstream 1466678 23186729 ~ 23195554 (-)

Expression


Co-expression Network