CI01000335_00884515_00888701


Basic Information

Item Value
gene id CI01000335_00884515_00888701
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 884338 ~ 888831 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000335_00884515_00888701.mRNA
CTATATATGAAGAACCTAATTATGAAAACCAATAAAATCCCCCAGGGTAAAAATACAGTATTTCTCTCTAATTGGGCCTGATTGATTGAAAGCTTGTTCCCAACAGCAAGTGTCAGTCGATCTATTGGTGTAGCAGAGCATGGTTCTAAACATCTCTAGCTTGAGTGTTTTTACATAATGAGATCCCAGTTCTTCCAGTATATGCTGTATACCGCACCGTATGCCTCTACTACAGGTGGAGAAATAACAGCGGTCCTAACGTTGAGATTTTGCCGTGCGAATGAGGCAAAATCCAGCAGCTTTCAGAGGCGCATCTGCAGCCGCTCGTTCGGTTGTCACATTGACATGCCGCTGTCTGCCCAGCGGTCATTAATATCGGAACAGCCCCCGAGTCTCCAGAGAACAACCAATAGCGGCGGGGCGGAGAGAAACTCTCGCACCTGATTGGCTAAACAGCAACGTCTGTCAGACAAGAACCGTTAGAGAAATAAGGAGAGACAGAAGAAAATGGATATATGCTGGTATTAATTTCTGATTGTGTAGTATTTTGGGTTGTCTTTGGGGGACATTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000335_00884515_00888701.mRNA True 574 mRNA 0.45 3 884338 888831

Neighbor

gene id symbol gene type direction distance location
CI01000335_00681430_00741137 DOCK4B, DOCK4 coding upstream 143116 681430 ~ 741222 (+)
CI01000335_00586957_00597421 TMEM168A coding upstream 286230 586957 ~ 598108 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding upstream 354680 526951 ~ 537487 (+)
CI01000335_00489106_00492720 NA coding upstream 391365 488688 ~ 492973 (+)
CI01000335_00286459_00296460 NA coding upstream 587082 284727 ~ 297256 (+)
CI01000335_00930276_00934328 NA coding downstream 41445 930276 ~ 936380 (+)
CI01000335_00988268_00990978 NA coding downstream 99437 988268 ~ 991337 (+)
CI01000335_01029328_01043603 NA coding downstream 140497 1029328 ~ 1043603 (+)
CI01000335_01055918_01061590 TNNT2D, TNNT2E coding downstream 167087 1055918 ~ 1061716 (+)
CI01000335_01109924_01114152 ELK3 coding downstream 221093 1109924 ~ 1114152 (+)
G477511 NA non-coding upstream 3307 863693 ~ 881031 (+)
G477651 NA non-coding upstream 23541 860503 ~ 860797 (+)
G477636 NA non-coding upstream 65985 818147 ~ 818353 (+)
G477605 NA non-coding upstream 81266 717098 ~ 803072 (+)
G477497 NA non-coding upstream 257048 624798 ~ 627290 (+)
G477660 NA non-coding downstream 2018 890849 ~ 891075 (+)
G477668 NA non-coding downstream 15092 903923 ~ 904142 (+)
G477669 NA non-coding downstream 15397 904228 ~ 904453 (+)
G477679 NA non-coding downstream 23355 912186 ~ 912406 (+)
G477681 NA non-coding downstream 26247 915078 ~ 955515 (+)
G477502 NA other upstream 329705 549522 ~ 554633 (+)

Expression


Co-expression Network