XLOC_013412 (pskh1)


Basic Information

Item Value
gene id XLOC_013412
gene name pskh1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 21728194 ~ 21748966 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026486
GCAGGGGTCGAAGCAAGCGGAGGTCTTTCCTTTCCCAAAAGGAAAAAAAGGAGAAgggggagaaagaaagaaaggtctACACAGGAAAAAAGGTGGTCCCACTCCGAAAACACCGTTTCCAAGCAGGCGGTCTCAATTTCATACTTTTCTTTTCGTATCGCCTCGTTTCCGAAGTGATACAAACACTTTAACAACCCTTATTTTGGACTGAATATCTTTGTTTTTGCAAATACTAAAGGGATGCTGTTTTTAACCGAATTAAAGTTTTAGAAATGCGGTGAAGTGAAGGGAAGAGCTGTAACTGGGGTGAGGAGGCTGGCGCTGGGAATCTTGCCTTTCTACTCCCACCATCGCCAATAAGAAAATACACTGTTAAGatTATTATCCATAAATTTCTCATTGATTGGAGTTCAGTTAATTTTGGAGGATTGATTGGAGAGGTTACTATAGTGTTTGACTGGACGTATCCTCTCGTGGCATTTGCCGGTGTGGCACTGCACCGTGCACCGTTTGGATGTTGCCTGGGAGATGAGGATGTGCTGCTGGCACCAGGAAGGTCGGAATTTGACGTGATGGGGTGCAGGACAAGCAAAGTCCTCCCAGAACCACCCGGTGACGTCCAACTTGACCTGGTCAAAAAGGTAGAGCCGCATCAGACGGATGTCTACAAAAACTTCATCAAATACGATGGTGGTGGGGAGAAAACAGGCTCGCCGTCCCCTCAGGGTCAAAGCCAGGCTGTTGCAAAGGTGAGCCAATCCCCTCCACCGGCTAATGACCAGCCAGAACCTGCTGACTCACACCGGAAGAAAGTAGCCAAATACAGAGCCAAATTTGACCCTCGAGTGACTGCCAAGTATGACATTAAAGCTTTGATAGGTCGGGGCAGTTTCAGTCGGGTAGTACGAGTGGAACACAGGAGCACACGGCAGCCATATGCCATTAAGATGATCGAGACGCGCTACCGTGAAGGCAGAGAAGTATGTGAATCTGAACTTTGCGTCCTACGACGTGTGCGCCACACTAATATTATCCAGCTAATGGAGGTGTTTGAGACGGCTGAGCGGGTCTACATGGTGATGGAGTTGGCCACTGGTGGAGAGCTGTTCGACCGCATCATCACCCGTGGGTCTTTCACAGAAAGGGACGCCACACGGGTGCTTCAGATGGTTCTTGATGGGGTGAAGTACCTCCATACATTGGGCATCACGCACAGGGACTTAAAGCCGGAAAACTTGCTTTACTACCATCCTGGTGCTGATTCCAAGATTATGATCACAGACTTTGGCTTGGCCAGCACACGAAAGAAAGGGGACGAATGTTTGATGAAGACTACCTGTGGAACACCTGAGTACATCGCTCCCGAGATACTCGTTCGCAAACCATACACTAATGCAGTAGATATGTGGGCACTGGGTGTCATTTCCTACATCCTGCTCAGTGGAACCATGCCTTTTGAGGATGACAATCGAATGCGTCTGTATCGACAGATCCTCAAAGGAAAATACAGCTTCTCTGGGGAGCCATGGCCAAGTGTTTCCAATCTGGCAAAGGACTTCATCGATCGCGTCCTCACGGTGGATCCTAATGAGCGGCTCTCTGCGGGCCAGGCACTCAAACACCCCTGGATTGTAAGTATGGCAGCTTCCTCCTCCATGAAGAATCTGCACCGGTCCATTTCCCAGAATCTCCTGAAGAGAGCTTCGTCACGCTGCCACAGCACAAAATCATCCCAGTCCACTCGCTCCAGCCGCTCCACCAAGTCCAGCAAGGCACGACGCCTTCGTGAAAAAGAGCTGCGAGAGCTGAACCGCCGGTACCAGCAGCAGTGCAATGGTTAAGAGGAAATAAGACAGCTTTTACTTTAGGAAAAACAGTGGAGAGAGCGGAACAACTTCCTGCTCCGTCACCACAGAGCCAATTAGCAGAAAGCCTCCTTCTAAAACTTCCCTCGTTTTCTATTTTTCTGCTGTCTCTTTCTTGTTTATTACCTTTTATgtgagtgttttatttatttattgctggtGTATTTTCATGTTCGTATTGTCCTTGAAAATTATCTCATTCAGCATTTTACATGATTGTATCTGTTGAACAGAATTTTACAAACGTCGCTGGAAGGACTAAGAATATACCTTCCTGATTTTGCTGTGAATTATTTTGTTATGGTACCCAGTCAGAAGATCGCTCTTCTGATGGGGGAAATGTGCTGTTTATTCATTATTACCAACAAATCACTAGACATATTGGTAGTTTTTTTCTTACCTTAACGTTACTTTGAACATGAGGGACGGTTAGGATACAACCATTGGTAACTGCAGGTCACATTTAGAATCAGTCtgctgtttaaatataataatgagccTTGATGGGATAGATTGGCAAAAAATGGAGATGTCTctatcatttactcagccttacTTTGTTCCAGTTTTGCAAAAGTGGCCTTAATGAACCATTTTGACACAAAAATCTTCATTTTGTAATCTTGTTTTGCCTCGGAAATATgttaagaacattttttttttttttaaattttgggaCACTTTGATAACTACAGAGACAATAGCCATGCTTTTGGTCTTCTCGCATTCTCTCTTATATAAGCTTGTCTTGGACTATTAGTATTTCTCTTTTTGGTTAAATTTATTAGGTAAATTATTGTAAAGTCTGTGAAACATTCTTTTGTCAAAGAGTAgttaaaaacaactaaatttgAAGTTACTTGAGGGTCCATATGTGAGTGTTAAGGCTGCCatacattatttgttattttatttctacaaaattaactaaaataatcaaaaaggATGTTTGAAAGACCACTGTGTACATTTGCAGCCCTTTTTTCCTTTCTAAAAGGAAAGTTAAATGCGTTAAATGCTCATTAAACtaagttaaacaggtttggaactgtATGAAGCTGAGTAAATGATTACATGAAAAATGGCAGTTAATTTTCTCAACCCTAGGCTATTCAAGATGTACTATGACTTTTCTTTGGTAGAAATACAATACCTGTGGTTCCTGATGATGCATAGAGATTTTGTGGAGCAAAACTACtcacaacattacattacattgcattataCCATGTGGGTGCAAACTCCAATGTGAGCCAATGTTGTGTGTTTACAATGGAAAAGGAGGACATGTATTGTGTTGTTCATCAAATTGGTCCACGATTTTGCTTAACCTGGATGCTGCAACCACCATAAAATAGTAAGATTGGTGTATCATTAGTGAGACACCAATCACtataatagtatataatagtGTTTAACAGTTTACCAAGGACCACAATTTAAGCTAAAGATAATATTTAATGttctaataaagaaaaaaaaaaacttggatgGGCTGAGAACGAgtactttaactgtacattttcAGTTTTCGATGAACTATATCTTTAATTTGGTCCAAAAATATCAAGGAGCTCTACATTCTGCACAATATGTGTGTTATTTATCCTAAATAAGACACATTATAAGAACCAAAAATGGTAGTATTAGTTGTTAATACCtgtcaaaaacatttcaaatcatCTTGAGACTTgactttaaatcaggggtgtcaaactcaattcctggagggccgcaacaCTGTAGAGTTtggttccagccctgcttcaacacagctatctgtaggtatcaaacaagcctaaagcacttaattagtttgatcaagtgtgtttaattagggttggaactaaactgtgctgagctgcagctttccaggaactgaatttgacacctgtgctttaaagAATTCGTTTACCAACCTGCACACTCAAACTTCTatcatgatttactcaccccAAAGTTGttccaaactgaaaaaaataaataaattcgtcTTCGTAACACAAATTAATATGTTTAAACCAATATTGTGTCCCACCAttgaaactctgaccaatatgAAGCAGTTTAATCCAAGTCTTCGGAAAAATCATGATCACTATATATAATGAGCACATTGTAGTCCTTTATTAACATATAAAGAACCTGTTTGACATACAATAACAAACCTCATTGGATCTTGTGTAAGCTCGAAGATGTCATGTGACAATCAAAAACGAACCTTGTTGGTTCTCTCATGTCAAGCAAGCATTCCAGAGCTTCCATAACCAAATTTGAAAGTAGTAAACACTGCTTGCTGATCAGTGTTTATATtcgaataaatttaattaaacctGTTCAATTTAGAAAGGGATTGCGTCTCTTATTTTTAATCTCTATGAATGTTTTAAAGCATCAGAGTTTGAGTGAACTGACTTTCAGCGGAGTCACAAttagatttaattaaaaatggcattaacactttacaataaggtttcagtAGTTAATGAATTTACAAACAAATgatgaacaaaaaaatattattttaattcccAGGTTCTGCTGGTTGAGTTTTACAAATTTtcattgccaatcttaagccaattgtgATCATTTGTATTGGGtcaatttggaatttccccaaccaTTGCAGAGCGCGGAGGACCAAAGTGAGTGCTCCGACTTGGCCCCACCCTGGTCCcgatgaacaatacatttattacagtgtgtatTCATCTTTGTCAATGttacttaatgaaaataaattcacTCTTTGTTAGTTCTCATTACCTCACAGTTCATTATGTTAACAAACACaatttgaattttaataatgcgtcagtaaatttaaaactataattaataaattccgTACAATTATTGTTCATTCTTGGTTTatgtcagtaaatacattacCTTAAATTAATgaaaccttaatgtaaagtgtgactaaaatatctatatttgtgCTTCGAACGTGAAGGTAAAACAACATGAAGGTCAACCGAttcaattttggggtgaactaaccttcgaaaaagacacaaaaatacAGTGTAGCCAAATGGGCTATTGATTTAGTCTTTAAATGTGGTCGGTGAAGAAACCTGCAGTGATTCTTGACTTCTGCAGTTGGATCTGCCTGTACATGTATTGCAGTAATTAATAACTGATGCTGATTGCTTTCTCAGTATGGGCGGCCAGTATTGGAAAGCCCTGAATCACAATCGGTTGCTTTCTCTGCCACCAGCTGTTGTTTCTTGAGCAAGACACTGAACACCATGAAGGCCTTTTGGCAGATTCTCACTCTTTccccccctgtcagaaaccagcAGCGATGTACCAAAGAAATTCCTGTGTGCCTGATGTATTAACAAGGAACATTTGGTGAGATCTGACATATGATTCCTCACGAAAATAATTACTGATAAAACTGTGATGATATGAAGATTTCTCAAAATGTGTTCTTAGAtctgttttttatgtttgttttttttatataaaagtgtATATCAAAAATTAAAGAGGAAAGGGAA
>TCONS_00026487
ACCAGGAAGGTCGGAATTTGACGTGATGGGGTGCAGGACAAGCAAAGTCCTCCCAGAACCACCCGGTGACGTCCAACTTGACCTGGTCAAAAAGGTAGAGCCGCATCAGACGGATGTCTACAAAAACTTCATCAAATACGATGGTGGTGGGGAGAAAACAGGCTCGCCGTCCCCTCAGGGTCAAAGCCAGGCTGTTGCAAAGGTGAGCCAATCCCCTCCACCGGCTAATGACCAGCCAGAACCTGCTGACTCACACCGGAAGAAAGTAGCCAAATACAGAGCCAAATTTGACCCTCGAGTGACTGCCAAGTATGACATTAAAGCTTTGATAGGTCGGGGCAGTTTCAGTCGGGTAGTACGAGTGGAACACAGGAGCACACGGCAGCCATATGCCATTAAGATGATCGAGACGCGCTACCGTGAAGGCAGAGAAGTATGTGAATCTGAACTTTGCGTCCTACGACGTGTGCGCCACACTAATATTATCCAGCTAATGGAGGTGTTTGAGACGGCTGAGCGGGTCTACATGGTGATGGAGTTGGCCACTGGTGGAGAGCTGTTCGACCGCATCATCACCCGTGGGTCTTTCACAGAAAGGGACGCCACACGGGTGCTTCAGATGGTTCTTGATGGGGTGAAGTACCTCCATACATTGGGCATCACGCACAGGGACTTAAAGCCGGAAAACTTGCTTTACTACCATCCTGGTGCTGATTCCAAGATTATGATCACAGACTTTGGCTTGGCCAGCACACGAAAGAAAGGGGACGAATGTTTGATGAAGACTACCTGTGGAACACCTGAGTACATCGCTCCCGAGATACTCGTTCGCAAACCATACACTAATGCAGTAGATATGTGGGCACTGGGTGTCATTTCCTACATCCTGCTCAGTGGAACCATGCCTTTTGAGGATGACAATCGAATGCGTCTGTATCGACAGATCCTCAAAGGAAAATACAGCTTCTCTGGGGAGCCATGGCCAAGTGTTTCCAATCTGGCAAAGGACTTCATCGATCGCGTCCTCACGGTGGATCCTAATGAGCGGCTCTCTGCGGGCCAGGCACTCAAACACCCCTGGATTGTAAGTATGGCAGCTTCCTCCTCCATGAAGAATCTGCACCGGTCCATTTCCCAGAATCTCCTGAAGAGAGCTTCGTCACGCTGCCACAGCACAAAATCATCCCAGTCCACTCGCTCCAGCCGCTCCACCAAGTCCAGCAAGGCACGACGCCTTCGTGAAAAAGAGCTGCGAGAGCTGAACCGCCGGTACCAGCAGCAGTGCAATGGTTAA
>TCONS_00026488
CATTTTTCAAGTTTTgaaaattgttttgttgttagCATATAACGGATGCATGCTGCCatacacacactgatgtttttctAAAAGACGcacagattaaaaacaaaaagtttttctTGCTTCTCAGCCATATTTATGATTCTGACTTCACAATATTTGCTGCAGGGGTCGAAGCAAGCGGAGGTCTTTCCTTTCCCAAAAGGAAAAAAAGGAGAAgggggagaaagaaagaaaggtctACACAGGAAAAAAGTTTTAGAAATGCGGTGAAGTGAAGGGAAGAGCTGTAACTGGGGTGAGGAGGCTGGCGCTGGGAATCTTGCCTTTCTACTCCCACCATCGCCAATAAGAAAATACACTGTTAAGatTATTATCCATAAATTTCTCATTGATTGGAGTTCAGTTAATTTTGGAGGATTGATTGGAGAGGTTACTATAGTGTTTGACTGGACGTATCCTCTCGTGGCATTTGCCGGTGTGGCACTGCACCGTGCACCGTTTGGATGTTGCCTGGGAGATGAGGATGTGCTGCTGGCACCAGGAAGGTCGGAATTTGACGTGATGGGGTGCAGGACAAGCAAAGTCCTCCCAGAACCACCCGGTGACGTCCAACTTGACCTGGTCAAAAAGGTAGAGCCGCATCAGACGGATGTCTACAAAAACTTCATCAAATACGATGGTGGTGGGGAGAAAACAGGCTCGCCGTCCCCTCAGGGTCAAAGCCAGGCTGTTGCAAAGGTGAGCCAATCCCCTCCACCGGCTAATGACCAGCCAGAACCTGCTGACTCACACCGGAAGAAAGTAGCCAAATACAGAGCCAAATTTGACCCTCGAGTGACTGCCAAGTATGACATTAAAGCTTTGATAGGTCGGGGCAGTTTCAGTCGGGTAGTACGAGTGGAACACAGGAGCACACGGCAGCCATATGCCATTAAGATGATCGAGACGCGCTACCGTGAAGGCAGAGAAGTATGTGAATCTGAACTTTGCGTCCTACGACGTGTGCGCCACACTAATATTATCCAGCTAATGGAGGTGTTTGAGACGGCTGAGCGGGTCTACATGGTGATGGAGTTGGCCACTGGTGGAGAGCTGTTCGACCGCATCATCACCCGTGGGTCTTTCACAGAAAGGGACGCCACACGGGTGCTTCAGATGGTTCTTGATGGGGTGAAGTACCTCCATACATTGGGCATCACGCACAGGGACTTAAAGCCGGAAAACTTGCTTTACTACCATCCTGGTGCTGATTCCAAGATTATGATCACAGACTTTGGCTTGGCCAGCACACGAAAGAAAGGGGACGAATGTTTGATGAAGACTACCTGTGGAACACCTGAGTACATCGCTCCCGAGATACTCGTTCGCAAACCATACACTAATGCAGTAGATATGTGGGCACTGGGTGTCATTTCCTACATCCTGCTCAGTGGAACCATGCCTTTTGAGGATGACAATCGAATGCGTCTGTATCGACAGATCCTCAAAGGAAAATACAGCTTCTCTGGGGAGCCATGGCCAAGTGTTTCCAATCTGGCAAAGGACTTCATCGATCGCGTCCTCACGGTGGATCCTAATGAGCGGCTCTCTGCGGGCCAGGCACTCAAACACCCCTGGATTGTAAGTATGGCAGCTTCCTCCTCCATGAAGAATCTGCACCGGTCCATTTCCCAGAATCTCCTGAAGAGAGCTTCGTCACGCTGCCACAGCACAAAATCATCCCAGTCCACTCGCTCCAGCCGCTCCACCAAGTCCAGCAAGGCACGACGCCTTCGTGAAAAAGAGCTGCGAGAGCTGAACCGCCGGTACCAGCAGCAGTGCAATGGTTAA

Function

symbol description
pskh1 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human PSKH1 (protein serine kinase H1).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050119-1 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human PSKH1 (protein serine kinase H1).

Ensembl:

ensembl_id ENSDARG00000056713

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026486 False 5380 mRNA 0.40 3 21728194 21748808
TCONS_00026487 False 1294 mRNA 0.52 2 21731733 21746421
TCONS_00026488 True 1827 mRNA 0.49 4 21731733 21748966

Neighbor

gene id symbol gene type direction distance location
XLOC_013410 fan1 coding downstream 2389 21686115 ~ 21725805 (-)
XLOC_013411 BX548157.1 coding downstream 8143 21712296 ~ 21720051 (-)
XLOC_013409 mbtps1 coding downstream 43139 21645309 ~ 21685055 (-)
XLOC_013408 slc38a8a coding downstream 87805 21622414 ~ 21640389 (-)
XLOC_013407 pnp6 coding downstream 456821 21257261 ~ 21271373 (-)
XLOC_013413 nrn1la coding upstream 33108 21782074 ~ 21910991 (-)
XLOC_013414 nutf2 coding upstream 164719 21913685 ~ 21929451 (-)
XLOC_013415 tsnaxip1 coding upstream 182775 21931741 ~ 21950751 (-)
XLOC_013416 pard6a coding upstream 279708 22028674 ~ 22094102 (-)
XLOC_013417 CT573204.2 coding upstream 334806 22083772 ~ 22083886 (-)
XLOC_013384 BX323829.1 misc downstream 2185963 19542102 ~ 19542231 (-)
XLOC_013398 BX470160.1 non-coding downstream 881881 20846190 ~ 20846313 (-)
XLOC_013395 BX470130.1 non-coding downstream 1094271 20633789 ~ 20633923 (-)
XLOC_013388 NA non-coding downstream 1408321 20285665 ~ 20319873 (-)
XLOC_013387 NA non-coding downstream 1579097 20140072 ~ 20149097 (-)
XLOC_013420 CR933017.1 non-coding upstream 801629 22550595 ~ 22552314 (-)
XLOC_013426 BX088710.1 non-coding upstream 990766 22739732 ~ 22753637 (-)
XLOC_013427 BX663522.1 non-coding upstream 1110513 22859479 ~ 22862467 (-)
XLOC_013428 NA non-coding upstream 1437763 23186729 ~ 23195554 (-)

Expression


Co-expression Network