G477347


Basic Information

Item Value
gene id G477347
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 175238 ~ 175473 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU547752
GCTTCCTGTACAGCTAAAGAGCTCTGAAACTAAAAGTAGATGCCAATGAATGCATGTAATATGTCAGAAAAAAAGATTTCATTAATAAAATCAAGATTTAATAAATCTTTCTGAATTTTTCTACTGCTTTCTCAAACTCTTCTGTAGCTTCCGCTATAAAGAAAGAGTAAATTTATTCAATTAAAATGAAACATGATTTAGTTTTCGTAAAAAAATTGACAAAAATACCATGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU547752 True 236 lncRNA 0.28 1 175238 175473

Neighbor

gene id symbol gene type direction distance location
CI01000335_00149953_00163006 TFEC coding upstream 11699 149953 ~ 163539 (+)
CI01000335_00103583_00132304 NA coding upstream 42809 103472 ~ 132429 (+)
CI01000335_00077557_00081374 CD5L coding upstream 93752 75813 ~ 81486 (+)
CI01000335_00193513_00197704 NA coding downstream 16400 191873 ~ 197764 (+)
CI01000335_00286459_00296460 NA coding downstream 109254 284727 ~ 297256 (+)
CI01000335_00489106_00492720 NA coding downstream 313215 488688 ~ 492973 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding downstream 351478 526951 ~ 537487 (+)
CI01000335_00586957_00597421 TMEM168A coding downstream 411484 586957 ~ 598108 (+)
G477346 NA non-coding upstream 620 174402 ~ 174618 (+)
G477300 NA non-coding upstream 29417 72166 ~ 145821 (+)
G477288 NA non-coding upstream 148511 26180 ~ 26727 (+)
G477276 NA non-coding upstream 155606 18228 ~ 19632 (+)
G477348 NA non-coding downstream 748 176221 ~ 176458 (+)
G477407 NA non-coding downstream 8991 184464 ~ 184694 (+)
G477409 NA non-coding downstream 13709 189182 ~ 189439 (+)
G477410 NA non-coding downstream 15311 190784 ~ 190990 (+)
G477502 NA other downstream 374049 549522 ~ 554633 (+)

Expression


Co-expression Network