G477410


Basic Information

Item Value
gene id G477410
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 190784 ~ 190990 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU547836
CTTTTAGACGAACACAATCAGAGATATATTTAAAAATATCCTTAGTCCTCCAAGGTTTATAATTGGCAGTGAATGGGGGGTCATGTTTTGAAGTCAAAATCCATCCATAAAAAAAGTAATCCATATGACTCCAGTGGGTTAATAAAGGCCTTCTGAAGCAAAGCGATGCATTTTTTGTAAGAAAAAAATATCCATATTTAAAACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU547836 True 207 lncRNA 0.32 1 190784 190990

Neighbor

gene id symbol gene type direction distance location
CI01000335_00149953_00163006 TFEC coding upstream 27245 149953 ~ 163539 (+)
CI01000335_00103583_00132304 NA coding upstream 58355 103472 ~ 132429 (+)
CI01000335_00077557_00081374 CD5L coding upstream 109298 75813 ~ 81486 (+)
CI01000335_00193513_00197704 NA coding downstream 883 191873 ~ 197764 (+)
CI01000335_00286459_00296460 NA coding downstream 93737 284727 ~ 297256 (+)
CI01000335_00489106_00492720 NA coding downstream 297698 488688 ~ 492973 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding downstream 335961 526951 ~ 537487 (+)
CI01000335_00586957_00597421 TMEM168A coding downstream 395967 586957 ~ 598108 (+)
G477409 NA non-coding upstream 1345 189182 ~ 189439 (+)
G477407 NA non-coding upstream 6090 184464 ~ 184694 (+)
G477348 NA non-coding upstream 14326 176221 ~ 176458 (+)
G477347 NA non-coding upstream 15311 175238 ~ 175473 (+)
G477346 NA non-coding upstream 16166 174402 ~ 174618 (+)
G477422 NA non-coding downstream 19803 210793 ~ 211595 (+)
G477430 NA non-coding downstream 63031 254021 ~ 254235 (+)
G477431 NA non-coding downstream 82753 273743 ~ 273950 (+)
G477435 NA non-coding downstream 88578 279568 ~ 279783 (+)
G477502 NA other downstream 358532 549522 ~ 554633 (+)

Expression


Co-expression Network