G477435


Basic Information

Item Value
gene id G477435
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000335
NCBI id null
chromosome length 1176510
location 279568 ~ 279783 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU547867
CTTTACACACTGTCTTTATATCTGGTCAGTAAGAAAGTTGAGATGTTAATTCAGTAACCGTGCTTACAAAGTAATTCAAACTGTTAACTTTTTGAGCGATTTTCAGCATGTTTCAACCATAATATTTACCAGTTTCTCCTGAGATAAAAAAGCTGGTGAAGTCTGCACTTATTCAAAGGCAAGCCAAATCTAAAGAGATAAGAGAAGAAAATATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU547867 True 216 lncRNA 0.33 1 279568 279783

Neighbor

gene id symbol gene type direction distance location
CI01000335_00193513_00197704 NA coding upstream 81804 191873 ~ 197764 (+)
CI01000335_00149953_00163006 TFEC coding upstream 116029 149953 ~ 163539 (+)
CI01000335_00103583_00132304 NA coding upstream 147139 103472 ~ 132429 (+)
CI01000335_00077557_00081374 CD5L coding upstream 198082 75813 ~ 81486 (+)
CI01000335_00286459_00296460 NA coding downstream 4944 284727 ~ 297256 (+)
CI01000335_00489106_00492720 NA coding downstream 208905 488688 ~ 492973 (+)
CI01000335_00526951_00528066 GPR85.L, GPR85 coding downstream 247168 526951 ~ 537487 (+)
CI01000335_00586957_00597421 TMEM168A coding downstream 307174 586957 ~ 598108 (+)
CI01000335_00681430_00741137 DOCK4B, DOCK4 coding downstream 401647 681430 ~ 741222 (+)
G477431 NA non-coding upstream 5618 273743 ~ 273950 (+)
G477430 NA non-coding upstream 25333 254021 ~ 254235 (+)
G477422 NA non-coding upstream 67973 210793 ~ 211595 (+)
G477410 NA non-coding upstream 88578 190784 ~ 190990 (+)
G477436 NA non-coding downstream 1141 280924 ~ 281129 (+)
G477438 NA non-coding downstream 11024 290807 ~ 291031 (+)
G477451 NA non-coding downstream 38583 318366 ~ 318596 (+)
G477453 NA non-coding downstream 41072 320855 ~ 321097 (+)
G477454 NA non-coding downstream 41885 321668 ~ 321907 (+)
G477502 NA other downstream 269739 549522 ~ 554633 (+)

Expression


Co-expression Network